DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-gamma and lrit1a

DIOPT Version :9

Sequence 1:NP_651649.1 Gene:DIP-gamma / 43417 FlyBaseID:FBgn0039617 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_001018174.2 Gene:lrit1a / 553943 ZFINID:ZDB-GENE-040924-5 Length:643 Species:Danio rerio


Alignment Length:323 Identity:67/323 - (20%)
Similarity:109/323 - (33%) Gaps:104/323 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 HHESSSQLDPDPEFIGFINNVTYPAGREAILACSVRNLGKNKVGWLRASDQTVLALQGRVVTHNA 92
            |:...|.|..:...  ::.|:||       |..|..||                           
Zfish   139 HNNQLSSLPSEAAL--YMKNITY-------LDLSSNNL--------------------------- 167

  Fly    93 RISVMHQDMHTW-KLKISKLRESDR-------GCYMC--------QINTSPMKKQVGCIDVQV-- 139
             ::|..:.::|| .:|.:...||.:       ..::|        |...|| ...|..||.::  
Zfish   168 -LTVPAEVLNTWLTIKPTLGAESSKLILGLHDNPWLCDCRLYDLVQFQKSP-SLSVAFIDTRLRC 230

  Fly   140 -PPDIINEESSADLAVQE-----------------GEDATLTCKATGNPQPRVTWRREDGEMILI 186
             .|:.::....:|..::.                 |.:..|.|...|.|.|.:.|||.||     
Zfish   231 ADPESLSGVLFSDAELRRCQGPRVHTAVARVRSAVGNNVLLRCGTVGVPIPELAWRRADG----- 290

  Fly   187 RKPGSRELMKVESYNG---SSLRLLRLERRQMGAYLCIASNDVPPAVSKRVSLSVQFAPMVRAPS 248
             ||.:..::...|..|   |.|.:..:..|..|.|:|.|:|....|.:. :||.:..||.:..|:
Zfish   291 -KPLNGTVLLENSKEGIVWSILSVPAVSYRDTGKYICKATNYAGSAEAV-ISLIINDAPKMENPT 353

  Fly   249 -----QLLGTPLGSDVQLECQVE-----ASPSPVSYWLKGARTSNGFASVSTASLESGSPGPE 301
                 :|......:.|:...|.:     .||:|          .||.....|.|.....||.|
Zfish   354 LDPKPKLKSKKPNTMVKAAYQEKHIATYVSPTP----------KNGLPLSGTVSYTGPYPGME 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-gammaNP_651649.1 IG_like 47..139 CDD:214653 20/107 (19%)
Ig 47..129 CDD:299845 17/97 (18%)
Ig 140..238 CDD:299845 28/117 (24%)
IG_like 247..355 CDD:214653 14/65 (22%)
Ig 256..351 CDD:299845 12/51 (24%)
lrit1aNP_001018174.2 leucine-rich repeat 61..84 CDD:275378
LRR_8 63..119 CDD:290566
LRR_RI <77..175 CDD:238064 11/72 (15%)
leucine-rich repeat 85..108 CDD:275378
LRR_8 108..167 CDD:290566 8/36 (22%)
leucine-rich repeat 109..132 CDD:275378
leucine-rich repeat 133..156 CDD:275378 3/18 (17%)
leucine-rich repeat 157..170 CDD:275378 6/47 (13%)
LRRCT 199..243 CDD:214507 8/44 (18%)
I-set 252..343 CDD:254352 26/97 (27%)
Ig 259..333 CDD:299845 23/79 (29%)
fn3 448..515 CDD:278470
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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