DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-gamma and dscamb

DIOPT Version :9

Sequence 1:NP_651649.1 Gene:DIP-gamma / 43417 FlyBaseID:FBgn0039617 Length:413 Species:Drosophila melanogaster
Sequence 2:XP_009289749.1 Gene:dscamb / 386937 ZFINID:ZDB-GENE-031118-67 Length:2020 Species:Danio rerio


Alignment Length:415 Identity:86/415 - (20%)
Similarity:133/415 - (32%) Gaps:136/415 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 PEFIGFINNVTYPAGREAILACSVRNLGKNKVGWLRASDQTVLALQGRVVTHNARISVMHQDMHT 103
            |..|..:.|||..|||:..:.|.:.......:.|.:.|:......:.|...:|.           
Zfish   504 PASIRPMKNVTAIAGRDTYIHCRIIGYPYYSIKWYKDSNLLPFNHRQRAFENNG----------- 557

  Fly   104 WKLKISKLRESDRGCYMCQINTSPMKKQVG---CIDVQVPPDIINEES----------------S 149
             .||:|.::.||.|.|.|.:...| :||:.   .:.|:|||.|.:.:|                |
Zfish   558 -TLKLSNVQNSDEGEYTCYVLVDP-EKQIHRSVHVTVKVPPLIQHSDSQSASIGQRVFIPCVVIS 620

  Fly   150 ADL----------------------------------------------------AVQE------ 156
            .||                                                    ||:.      
Zfish   621 GDLPMSITWHKDGRPINASLGVTIDNIDFTSSLRISNLSEIHNGSYTCIARNEAAAVEHSIQLIV 685

  Fly   157 -----------------GEDATLTCKATGNPQPRVTWRREDGEMILIRKP-----GSRELMKVES 199
                             |:..||.|.|.|||.|.:.|....|..:...:|     |||    |:.
Zfish   686 KVPPHFEVQPKDQDGIYGKSVTLNCSAKGNPIPTIVWNHSKGAGVPQFQPIALNSGSR----VQL 746

  Fly   200 YNGSSLRLLRLERRQMGAYLCIASNDVPPAVSKRVSLSVQFAPMVRAPSQLLGTPLGSDVQLECQ 264
            ....||.:..:.....|.|||..||||...:||.:.|:|:...|:.:.........|...::.|.
Zfish   747 LENGSLLIKHVLEEDAGFYLCKVSNDVGADISKSMYLTVKIPAMITSYPNTTRAEQGHMTEMSCT 811

  Fly   265 VEASPSPVSYWLKGARTSNGFASVSTASLESGSPGPEMLLDGPKYGITERRDGYRGVMLLVVRSF 329
            ..........|.|                ||....|:|    .:|.:|.:..|...:..|.:...
Zfish   812 AHGEKPIKVRWEK----------------ESHIINPDM----SRYVVTVKEVGDEVISTLQILHT 856

  Fly   330 SPSDVGTYHCVSTNSLGRAEGTLRL 354
            ...|.|.:.|::.||.|..:|.::|
Zfish   857 VREDSGFFSCIAINSYGEDKGIIQL 881

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-gammaNP_651649.1 IG_like 47..139 CDD:214653 23/94 (24%)
Ig 47..129 CDD:299845 20/81 (25%)
Ig 140..238 CDD:299845 38/193 (20%)
IG_like 247..355 CDD:214653 20/108 (19%)
Ig 256..351 CDD:299845 18/94 (19%)
dscambXP_009289749.1 I-set 132..198 CDD:254352
I-set 225..310 CDD:254352
IGc2 239..300 CDD:197706
IG_like 320..400 CDD:214653
IGc2 328..391 CDD:197706
IG_like 417..501 CDD:214653
Ig 424..498 CDD:143165
IG_like 511..592 CDD:214653 22/93 (24%)
IGc2 518..576 CDD:197706 15/69 (22%)
I-set 595..685 CDD:254352 9/89 (10%)
Ig 612..682 CDD:143165 5/69 (7%)
I-set 689..785 CDD:254352 29/99 (29%)
Ig7_DSCAM 706..785 CDD:143211 28/82 (34%)
IG_like 795..883 CDD:214653 20/107 (19%)
Ig 803..890 CDD:299845 20/99 (20%)
FN3 887..980 CDD:238020
FN3 987..1084 CDD:238020
FN3 1092..1185 CDD:238020
FN3 1190..1279 CDD:238020
IGc2 1302..1367 CDD:197706
FN3 1398..1471 CDD:238020
FN3 1485..1557 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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