DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-gamma and Sdk2

DIOPT Version :9

Sequence 1:NP_651649.1 Gene:DIP-gamma / 43417 FlyBaseID:FBgn0039617 Length:413 Species:Drosophila melanogaster
Sequence 2:XP_006247755.1 Gene:Sdk2 / 360652 RGDID:1310397 Length:2175 Species:Rattus norvegicus


Alignment Length:380 Identity:91/380 - (23%)
Similarity:151/380 - (39%) Gaps:83/380 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LQSTLFVILIMATKCG-----SGSTQNQHHESSSQL-----------DP-DPEFIGFINNVTYPA 52
            |::||.::..:|...|     :.:.:|..:::|..:           || .|..|....|.:..|
  Rat   167 LENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVA 231

  Fly    53 G-REAILAC--SVRNLGKNKVGWLRASDQTVLALQGRVVTHNARISVMHQDMHTWKLKISKLRES 114
            | .|..:.|  :.|.|.|..:.|.:  |..:|:  ..:..:|.|:::.:..:            |
  Rat   232 GTSEVTMECVANARPLIKLHIVWKK--DGALLS--NGISDYNRRLTITNPMV------------S 280

  Fly   115 DRGCYMCQI-----NTSPMKKQVGCIDVQVPPDIINEESSADLAVQEGEDATLTCKATGNPQPRV 174
            |.|.|.|:.     :.:|:.:. ..:.|..||..:.|......|..| :...:.|:|.|.|.|.:
  Rat   281 DAGYYECEAMLRSSSVAPVTRG-AYLSVLEPPQFVREPERHITAEME-KVVDIPCRAKGVPPPSI 343

  Fly   175 TWRREDGEMILIRKPGSRELMKVESYNGSSLRLLRLERRQMGAYLCIASNDVPPAVSKRVSLSVQ 239
            ||.: |..::.:.|     |.:.:..:...|::..|.....|...|.|.|....|.:........
  Rat   344 TWYK-DAALVEVGK-----LTRFKQRSDGGLQISGLLPDDTGMVQCFAHNAAGEAQTSTYLAVTS 402

  Fly   240 FAP-MVRAPSQLLGTPL-GSDVQLECQVEASPSPVSYWLKGARTSNGFASVSTASLESGSPGPEM 302
            .|| :.|.|  |..|.: |..|.|.|:...:|.|...|.||.|.           |.|||     
  Rat   403 IAPNITRGP--LDSTVIDGMSVVLACETSGAPRPAITWQKGERI-----------LASGS----- 449

  Fly   303 LLDGPKYGITERRDGYRGVMLLVVRSFSP---SDVGTYHCVSTNSLGRAEGTLRL 354
             :..|::.:.|     .|.:|:     ||   ||.|||.|::|||.|..|.:..|
  Rat   450 -VQLPRFTLLE-----SGSLLI-----SPTHISDAGTYTCLATNSRGVDEASADL 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-gammaNP_651649.1 IG_like 47..139 CDD:214653 20/99 (20%)
Ig 47..129 CDD:299845 19/89 (21%)
Ig 140..238 CDD:299845 22/97 (23%)
IG_like 247..355 CDD:214653 35/112 (31%)
Ig 256..351 CDD:299845 31/97 (32%)
Sdk2XP_006247755.1 IG_like 43..112 CDD:214653
IGc2 43..101 CDD:197706
IG_like 123..206 CDD:214653 7/38 (18%)
Ig 135..191 CDD:299845 5/23 (22%)
IG_like 225..307 CDD:214653 19/98 (19%)
IGc2 236..289 CDD:197706 14/68 (21%)
I-set 311..400 CDD:254352 21/95 (22%)
Ig 329..397 CDD:143165 17/73 (23%)
I-set 405..495 CDD:254352 37/118 (31%)
Ig 419..495 CDD:299845 32/102 (31%)
Ig 505..589 CDD:299845
IG_like 505..589 CDD:214653
FN3 593..684 CDD:238020
FN3 696..789 CDD:238020
FN3 797..893 CDD:238020
FN3 898..986 CDD:238020
FN3 996..1090 CDD:238020
FN3 1102..1197 CDD:238020
FN3 1204..1293 CDD:238020
FN3 1304..1397 CDD:238020
FN3 1403..1487 CDD:238020
FN3 1506..1619 CDD:238020
FN3 1629..1722 CDD:238020
FN3 1727..1808 CDD:238020
FN3 1840..1919 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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