DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-gamma and LRIT3

DIOPT Version :9

Sequence 1:NP_651649.1 Gene:DIP-gamma / 43417 FlyBaseID:FBgn0039617 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_940908.3 Gene:LRIT3 / 345193 HGNCID:24783 Length:679 Species:Homo sapiens


Alignment Length:268 Identity:61/268 - (22%)
Similarity:89/268 - (33%) Gaps:52/268 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 GEDATLTCKATGNPQPRVTWRREDGEMI---LIRKPGSRELMKVESYNGSSLRLLRLERRQMGAY 218
            |.:..|.|.|||.|.|::||.|.|...:   :|::  |.|    |....|.:.|..:..:..|.|
Human   268 GSNVLLRCDATGFPTPQITWTRSDSSPVNYTVIQE--SPE----EGVRWSIMSLTGISSKDAGDY 326

  Fly   219 LCIASN--DVPPAVSKRVSLSVQFAPMVRAPSQLLGTPLGSDVQLECQVEASPSPVSYWLKGART 281
            .|.|.|  .:..||.....|.:...|:....|:..|.....|||.......|.|..|.:|    .
Human   327 KCKAKNLAGMSEAVVTVTV
LGITTTPIPPDTSERTGDHPEWDVQPGSGRSTSVSSASSYL----W 387

  Fly   282 SNGFASVSTASLESGSPGPEMLLDGPKYGITERRDGYRGVMLLVVRSFSPSDVGTYHCVSTNSLG 346
            |:.|:..|:.|..:.||                    .......:..||.|.|.:...:|| |:.
Human   388 SSSFSPTSSFSASTLSP--------------------PSTASFSLSPFSSSTVSSTTTLST-SIS 431

  Fly   347 RAEGTLRLYEIKLH----------------PGASASNDDHLNYIGGLEEAARNAGRSNRTTWQPL 395
            .:.........:||                |.||.|..:.|..:........||...|.......
Human   432 ASTTMANKRSFQLHQGGKRNLKVAKNGSKLPPASTSKKEELALLDQTMLTETNAAIENLRVVSET 496

  Fly   396 LAMLMLLW 403
            ...:.|.|
Human   497 KESVTLTW 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-gammaNP_651649.1 IG_like 47..139 CDD:214653
Ig 47..129 CDD:299845
Ig 140..238 CDD:299845 26/85 (31%)
IG_like 247..355 CDD:214653 22/107 (21%)
Ig 256..351 CDD:299845 20/94 (21%)
LRIT3NP_940908.3 LRR 1 56..79
leucine-rich repeat 59..82 CDD:275378
LRR_8 61..117 CDD:290566
LRR 2 80..103
leucine-rich repeat 83..106 CDD:275378
LRR 3 104..128
LRR_8 105..165 CDD:290566
LRR_4 105..146 CDD:289563
leucine-rich repeat 107..130 CDD:275378
LRR 4 129..151
LRR_4 131..170 CDD:289563
leucine-rich repeat 131..154 CDD:275378
LRR 5 152..175
leucine-rich repeat 155..168 CDD:275378
Ig 267..345 CDD:299845 25/82 (30%)
IG_like 267..345 CDD:214653 25/82 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 351..375 6/23 (26%)
FN3 486..550 CDD:214495 3/19 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.