DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-gamma and HSPG2

DIOPT Version :10

Sequence 1:NP_651649.1 Gene:DIP-gamma / 43417 FlyBaseID:FBgn0039617 Length:413 Species:Drosophila melanogaster
Sequence 2:XP_011539620.1 Gene:HSPG2 / 3339 HGNCID:5273 Length:4574 Species:Homo sapiens


Alignment Length:389 Identity:93/389 - (23%)
Similarity:135/389 - (34%) Gaps:107/389 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 TQNQHHESSSQLDPDPEFIGFI-----NNVTY--------------------------------- 50
            |:||..|.:..:.|:...|..:     |:.||                                 
Human  3241 TRNQELEDNVHISPNGSIITIVGTRPSNHGTYRCVASNAYGVAQSVVNLSVHGPPTVSVLPEGPV 3305

  Fly    51 --PAGREAILACSVRNLGKNKVGWLRASDQTVLALQGRVVTHNARISVMHQDMHTWKLKISKLRE 113
              ..|:...|.|......::...|.|.| .|...|:.|  |:..      .|.|. .|:||..:.
Human  3306 WVKVGKAVTLECVSAGEPRSSARWTRIS-STPAKLEQR--TYGL------MDSHA-VLQISSAKP 3360

  Fly   114 SDRGCYMC--QINTSPMKKQVGCI---DVQVP--PDIINEESSADLAVQEGEDATLTCKATGNPQ 171
            ||.|.|:|  |......:|||..|   ....|  |.:..||  |:|.|:.|..|||.|.|||:|.
Human  3361 SDAGTYVCLAQNALGTAQKQVEVIVDTGAMAPGAPQVQAEE--AELTVEAGHTATLRCSATGSPA 3423

  Fly   172 PRVTWRREDGEMILIRKPGSRELMKVESYNGSSLRLLRLERRQMGAYLCIASNDVPPA--VSKRV 234
            |.:.|.:       :|.|    |.......|.:|.:.|:.::..|.|:|   |...||  ....:
Human  3424 PTIHWSK-------LRSP----LPWQHRLEGDTLIIPRVAQQDSGQYIC---NATSPAGHAEATI 3474

  Fly   235 SLSVQFAPMVRAPSQLLGTPLGSDVQLECQVEASPSPVSYWLKGARTSNGFASVSTASLESGSPG 299
            .|.|:..|......:......|..|||:|....:|.....|   :|..:.....:||..|     
Human  3475 ILHVESPPYATTVPEHASVQAGETVQLQCLAHGTPPLTFQW---SRVGSSLPGRATARNE----- 3531

  Fly   300 PEMLLDGPKYGITERRDGYRGVMLLVVRSFSPSDVGTYHCVSTNSLGRAEGTLRLYEIKLHPGA 363
                                   ||.....:|.|.|.|.|..||.:|.||...:|. ::..||:
Human  3532 -----------------------LLHFERAAPEDSGRYRCRVTNKVGSAEAFAQLL-VQGPPGS 3571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-gammaNP_651649.1 Ig 47..129 CDD:472250 23/118 (19%)
Ig strand B 56..60 CDD:409353 1/3 (33%)
Ig strand C 69..73 CDD:409353 0/3 (0%)
Ig strand E 104..108 CDD:409353 1/3 (33%)
Ig strand F 118..123 CDD:409353 2/6 (33%)
Ig 141..238 CDD:472250 30/98 (31%)
Ig strand B 160..164 CDD:409562 3/3 (100%)
Ig strand C 173..177 CDD:409562 0/3 (0%)
Ig strand E 203..207 CDD:409562 1/3 (33%)
Ig strand F 217..222 CDD:409562 2/4 (50%)
Ig strand G 231..234 CDD:409562 0/2 (0%)
IG_like 247..355 CDD:214653 23/107 (21%)
Ig strand B 259..263 CDD:409358 3/3 (100%)
Ig strand C 272..276 CDD:409358 0/3 (0%)
Ig strand E 317..326 CDD:409358 2/8 (25%)
Ig strand F 336..341 CDD:409358 2/4 (50%)
HSPG2XP_011539620.1 Ig strand G 3834..3837 CDD:409353
LamG 3848..4008 CDD:238058
EGF_CA <4035..4064 CDD:238011
EGF_CA <4076..4105 CDD:238011
LamG 4117..4266 CDD:238058
EGF 4291..4321 CDD:394967
EGF_CA 4328..4359 CDD:238011
LamG 4386..4545 CDD:238058
SEA 80..193 CDD:214554
LDLa 216..251 CDD:238060
LDLa 302..336 CDD:238060
LDLa 342..376 CDD:238060
LDLa 385..420 CDD:238060
Ig_Perlecan_like 438..515 CDD:143220
Ig strand B 441..447 CDD:143220
Ig strand C 454..459 CDD:143220
Ig strand E 479..483 CDD:143220
Ig strand F 492..498 CDD:143220
Ig strand G 507..513 CDD:143220
LamB 608..734 CDD:214597
EGF_Lam 782..824 CDD:238012
EGF_Lam 831..888 CDD:238012
Laminin_EGF 897..939 CDD:395007
LamB 1003..1130 CDD:214597
EGF_Lam 1176..1225 CDD:238012
EGF_Lam 1227..1282 CDD:238012
Laminin_EGF 1293..1340 CDD:395007
LamB 1574..1699 CDD:214597
EGF_Lam 1746..1794 CDD:238012
Laminin_EGF 1796..1851 CDD:395007
IG_like 1866..1946 CDD:214653
Ig strand B 1877..1881 CDD:409353
Ig strand C 1890..1895 CDD:409353
Ig strand E 1912..1916 CDD:409353
Ig strand F 1926..1931 CDD:409353
Ig strand G 1939..1942 CDD:409353
IgI_Perlecan_like 1954..2039 CDD:409412
Ig strand A 1954..1958 CDD:409412
Ig strand A' 1963..1966 CDD:409412
Ig strand B 1970..1980 CDD:409412
Ig strand C 1986..1990 CDD:409412
Ig strand C' 1993..1995 CDD:409412
Ig strand D 2000..2005 CDD:409412
Ig strand E 2006..2012 CDD:409412
Ig strand F 2019..2027 CDD:409412
Ig strand G 2030..2039 CDD:409412
Ig 2049..2133 CDD:472250
Ig strand B 2066..2070 CDD:409353
Ig strand C 2079..2082 CDD:409353
Ig strand E 2099..2103 CDD:409353
Ig strand F 2113..2118 CDD:409353
Ig strand G 2126..2129 CDD:409353
I-set 2139..2225 CDD:400151
Ig strand B 2156..2160 CDD:409353
Ig strand C 2169..2173 CDD:409353
Ig strand E 2191..2195 CDD:409353
Ig strand F 2205..2210 CDD:409353
IG_like 2240..2317 CDD:214653
Ig strand B 2251..2255 CDD:409353
Ig strand C 2264..2268 CDD:409353
Ig strand E 2284..2287 CDD:409353
Ig strand F 2297..2302 CDD:409353
Ig strand G 2310..2313 CDD:409353
IG_like 2341..2418 CDD:214653
Ig strand B 2352..2356 CDD:409353
Ig strand C 2365..2369 CDD:409353
Ig strand E 2384..2388 CDD:409353
Ig strand F 2398..2403 CDD:409353
Ig strand G 2411..2414 CDD:409353
IG_like 2434..2508 CDD:214653
Ig strand B 2445..2449 CDD:409353
Ig strand C 2458..2462 CDD:409353
Ig strand E 2478..2481 CDD:409353
Ig strand F 2491..2496 CDD:409353
IG_like 2530..2607 CDD:214653
Ig strand C 2554..2558 CDD:409353
Ig strand E 2573..2577 CDD:409353
Ig strand F 2587..2592 CDD:409353
Ig 2620..2703 CDD:472250
Ig strand C 2650..2654 CDD:409353
Ig strand E 2669..2673 CDD:409353
Ig strand F 2683..2688 CDD:409353
IG_like 2731..2800 CDD:214653
Ig strand C 2747..2751 CDD:409353
Ig strand E 2766..2770 CDD:409353
Ig strand F 2780..2785 CDD:409353
IG_like 2819..2896 CDD:214653
Ig strand C 2843..2847 CDD:409353
Ig strand E 2862..2866 CDD:409353
Ig strand F 2876..2881 CDD:409353
Ig strand G 2890..2893 CDD:409353
IG_like 2916..2993 CDD:214653
Ig strand C 2940..2944 CDD:409353
Ig strand E 2959..2963 CDD:409353
Ig strand F 2973..2978 CDD:409353
IG_like 3016..3093 CDD:214653
Ig strand B 3027..3031 CDD:409353
Ig strand C 3040..3044 CDD:409353
Ig strand E 3059..3063 CDD:409353
Ig strand F 3073..3078 CDD:409353
Ig strand G 3086..3089 CDD:409353
IG_like 3115..3192 CDD:214653
Ig strand B 3125..3129 CDD:409353
Ig strand C 3138..3142 CDD:409353
Ig strand E 3158..3161 CDD:409353
Ig strand F 3171..3176 CDD:409353
Ig strand G 3184..3188 CDD:409353
Ig 3205..3291 CDD:472250 9/49 (18%)
Ig strand B 3222..3226 CDD:409353
Ig strand C 3235..3240 CDD:409353
Ig strand E 3257..3261 CDD:409353 1/3 (33%)
Ig strand F 3271..3276 CDD:409353 2/4 (50%)
Ig strand G 3284..3287 CDD:409353 0/2 (0%)
IG_like 3303..3385 CDD:214653 24/91 (26%)
Ig strand B 3313..3317 CDD:409353 1/3 (33%)
Ig strand C 3326..3330 CDD:409353 0/3 (0%)
Ig strand E 3351..3355 CDD:409353 1/4 (25%)
Ig strand F 3365..3370 CDD:409353 2/4 (50%)
Ig 3404..3478 CDD:472250 26/87 (30%)
Ig strand B 3412..3416 CDD:409353 3/3 (100%)
Ig strand C 3425..3429 CDD:409353 0/3 (0%)
Ig strand E 3444..3448 CDD:409353 1/3 (33%)
Ig strand F 3458..3463 CDD:409353 2/7 (29%)
Ig strand G 3471..3474 CDD:409353 0/2 (0%)
I-set 3482..3565 CDD:400151 25/114 (22%)
Ig strand B 3499..3503 CDD:409353 3/3 (100%)
Ig strand C 3512..3516 CDD:409353 1/6 (17%)
Ig strand E 3531..3535 CDD:409353 3/31 (10%)
Ig strand F 3545..3550 CDD:409353 2/4 (50%)
Ig 3588..3666 CDD:472250
Ig strand B 3600..3604 CDD:409353
Ig strand C 3613..3617 CDD:409353
Ig strand E 3632..3636 CDD:409353
Ig strand F 3646..3651 CDD:409353
Ig strand G 3659..3662 CDD:409353
Ig 3676..3755 CDD:472250
Ig strand B 3689..3693 CDD:409353
Ig strand C 3702..3706 CDD:409353
Ig strand E 3721..3725 CDD:409353
Ig strand F 3735..3740 CDD:409353
I-set 3764..3841 CDD:400151
Ig strand B 3775..3779 CDD:409353
Ig strand C 3788..3792 CDD:409353
Ig strand E 3807..3811 CDD:409353
Ig strand F 3821..3826 CDD:409353
Blue background indicates that the domain is not in the aligned region.

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