DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-gamma and sdk

DIOPT Version :9

Sequence 1:NP_651649.1 Gene:DIP-gamma / 43417 FlyBaseID:FBgn0039617 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_001284756.1 Gene:sdk / 31017 FlyBaseID:FBgn0021764 Length:2265 Species:Drosophila melanogaster


Alignment Length:357 Identity:81/357 - (22%)
Similarity:146/357 - (40%) Gaps:92/357 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 AILAC-SVRNLGKNKVG-WLRASDQTV------LALQGRVVTHNARISVMHQDMHTWKLKISKLR 112
            |:..| ::...|:|... |||...:|.      || |.|::    |:...|..:.:  .|.|:..
  Fly   429 AMFQCLAINEAGENSASTWLRVKTKTAKNRVKRLA-QPRIL----RVRASHAGLGS--EKGSESG 486

  Fly   113 ESDRGCYMCQINTSPMKKQVGCIDVQVPPDIINEESSADLAVQEGEDATLTCKATGNPQPRVTWR 177
            .|||.... :..::|:        :::||.        ::...:|:|||::|:|.|:|.|.:||.
  Fly   487 SSDRRKEF-RFASAPI--------MELPPQ--------NVTALDGKDATISCRAVGSPNPNITWI 534

  Fly   178 REDGEMILIRKPGSRELMKVESYNGSSLRLLRLERRQMGAYLCIASNDVPPAVSKRVSLSVQFAP 242
            ..:.:::.|..       :|:......|.:..:.....|.|:|:.:|:. .:|.....|||    
  Fly   535 YNETQLVDISS-------RVQILESGDLLISNIRSVDAGLYICVRANEA-GSVKGEAYLSV---- 587

  Fly   243 MVRAPSQLLGTP------LGSDVQLECQVEASPSPVSY---WLKGARTSNGFASVSTASLESGSP 298
            :||  :|::..|      ||....|:|:|.:.|| |.|   |.:..::|...::.....:::   
  Fly   588 LVR--TQIIQPPVDTTVLLGLTATLQCKVSSDPS-VPYNIDWYREGQSSTPISNSQRIGVQA--- 646

  Fly   299 GPEMLLDGPKYGITERRDGYRGVMLLVVRSFSPSDVGTYHCVSTNSLGRAEGTLRLYEIKL-HPG 362
                             ||.     |.:::...||||:|.||.|:..|......||..|:| .|.
  Fly   647 -----------------DGQ-----LEIQAVRASDVGSYACVVTSPGGNETRAARLSVIELPFPP 689

  Fly   363 ASASNDDHLNYIGGLEEAARNAGRSNRTTWQP 394
            ::..          :|.......||...:|.|
  Fly   690 SNVK----------VERLPEPQQRSINVSWTP 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-gammaNP_651649.1 IG_like 47..139 CDD:214653 20/90 (22%)
Ig 47..129 CDD:299845 20/80 (25%)
Ig 140..238 CDD:299845 22/97 (23%)
IG_like 247..355 CDD:214653 26/116 (22%)
Ig 256..351 CDD:299845 22/97 (23%)
sdkNP_001284756.1 Ig 71..157 CDD:299845
I-set 72..150 CDD:254352
Ig 172..245 CDD:299845
IG_like 280..356 CDD:214653
Ig 280..343 CDD:299845
IG_like 375..450 CDD:214653 6/20 (30%)
Ig 378..447 CDD:143165 4/17 (24%)
Ig 506..587 CDD:299845 21/96 (22%)
IG_like 506..587 CDD:214653 21/96 (22%)
I-set 592..682 CDD:254352 27/115 (23%)
Ig 595..682 CDD:299845 26/112 (23%)
FN3 686..789 CDD:238020 6/36 (17%)
FN3 798..893 CDD:238020
FN3 901..1005 CDD:238020
fn3 1011..1094 CDD:278470
FN3 1108..1202 CDD:238020
FN3 1210..1308 CDD:238020
fn3 1317..1402 CDD:278470
FN3 1415..1507 CDD:238020
FN3 1513..1608 CDD:238020
fn3 1617..1708 CDD:278470
FN3 1722..1823 CDD:238020
FN3 1828..1920 CDD:238020
FN3 1927..2016 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.