DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-gamma and Vsig10

DIOPT Version :9

Sequence 1:NP_651649.1 Gene:DIP-gamma / 43417 FlyBaseID:FBgn0039617 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_001028483.2 Gene:Vsig10 / 231668 MGIID:2448533 Length:558 Species:Mus musculus


Alignment Length:376 Identity:79/376 - (21%)
Similarity:124/376 - (32%) Gaps:111/376 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LDPDPE--FIGFI-NNVTYPAGREAILACSVRNLGKNKVGWLRASDQTVLALQGRVVTHNA---- 92
            :.||.|  .||.: :|||        |.|...:..:..|.|.|...:...     :|:.|:    
Mouse    45 IHPDLEAVAIGEVHDNVT--------LRCGSASGSRGLVTWYRNDSEPAF-----LVSFNSSLPP 96

  Fly    93 ---RISVMHQDMHTWKLKISKLRESDRGCYMCQ--INTS---PMKKQV--GCIDVQVPPDIINEE 147
               |.|:  :|  ...|:|..||..|.|.|.||  :|.:   |::.:|  |...|:|........
Mouse    97 AAPRFSL--ED--AGALRIEALRLEDDGNYTCQEVLNETHWFPVRLRVASGPAYVEVNISATGTL 157

  Fly   148 SSADLAVQEGEDATLTCKATGNPQPRVTWRREDGEMILIRKPGSRELMKVESYNGSSLRLLRLER 212
            .:..|....|......|.:...|.|.|.|        .|:.....|.:. ::.:.:|..|:.:.:
Mouse   158 PNGTLYAARGSQVDFNCCSAAQPPPEVEW--------WIQTHSIPEFLG-KNLSANSFTLMLMSQ 213

  Fly   213 RQMGAYLCIASNDVPPAVSKRVSLSVQFAPMVRAPSQLLGTPLGSDVQLECQVEAS--------- 268
            ...|.|.|.|:|.:.....|..:..:.:.|...||              :|.||.|         
Mouse   214 NLQGNYTCSATNVLSGRQRKVTTELLVYWPPPSAP--------------QCSVEVSSESTTLELA 264

  Fly   269 -------PSPVSYWL-KGARTSNGFASVSTASLESGSPGPEMLLDGPKYGITERRDGYRGVMLLV 325
                   |.|...|. :...|..|.:.:.|.|       |..||:|.|                 
Mouse   265 CNWDGGYPDPTFLWTEEPGGTIMGNSKLQTLS-------PAQLLEGKK----------------- 305

  Fly   326 VRSFSPSDVGTYHCVSTNSLGRAEGTLRLYEIKLHPGASASNDDHLNYIGG 376
                       :.||..:.||...|...:  :||......|......::||
Mouse   306 -----------FKCVGNHILGPESGASCV--VKLSSPLLPSQPMRTCFVGG 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-gammaNP_651649.1 IG_like 47..139 CDD:214653 27/105 (26%)
Ig 47..129 CDD:299845 24/93 (26%)
Ig 140..238 CDD:299845 17/97 (18%)
IG_like 247..355 CDD:214653 22/124 (18%)
Ig 256..351 CDD:299845 20/111 (18%)
Vsig10NP_001028483.2 Ig 47..135 CDD:299845 28/104 (27%)
IG_like 55..140 CDD:214653 25/101 (25%)
IG_like 160..240 CDD:214653 17/88 (19%)
Ig <184..238 CDD:299845 12/62 (19%)
IG_like 341..421 CDD:214653 2/3 (67%)
Ig 345..418 CDD:143165
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 477..515
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 532..558
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.