DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-gamma and igcm-2

DIOPT Version :9

Sequence 1:NP_651649.1 Gene:DIP-gamma / 43417 FlyBaseID:FBgn0039617 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_001362087.1 Gene:igcm-2 / 180913 WormBaseID:WBGene00020130 Length:802 Species:Caenorhabditis elegans


Alignment Length:349 Identity:85/349 - (24%)
Similarity:123/349 - (35%) Gaps:100/349 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 AGREAILACSVR--NLGKNKVGWLRASDQTVLA------------LQGRVVTHNARISVMHQDMH 102
            ||....|.||:.  |.....:.| |...|.:|:            ||||:    ||...:...:|
 Worm    27 AGAPITLPCSISLFNEESFSLDW-RKDGQLILSAFGQEQGHVTPTLQGRL----ARDGFLGITIH 86

  Fly   103 TWKLKISKLRESDRGCYMCQIN------TSPMKKQVGCIDVQVPPDIINEESSADLAVQEGEDAT 161
            :       :.:.|.|.|.|.:.      |.|.|.....:.|.|||.||:...:|.:..:.|.|..
 Worm    87 S-------VTDGDAGVYQCIVT
KFSKQPTRPEKGLSAKLVVNVPPVIISPSKNAIIHKKVGADLI 144

  Fly   162 LTCKATGNPQPRVTWRREDGEMILIRKPGSRELMKVESYNGSSLRLLRLERRQMGAYLCIASNDV 226
            ..|||.|.|.|.:||.|  .|.|:...|              .|.|..||....|.|.|:|.|..
 Worm   145 FECKAEGAPSPEITWSR--NEQIISTSP--------------VLTLSNLEEGDKGLYTCLAVNIE 193

  Fly   227 PPAVSKRVSLSVQFA--------PMVRAPSQLLGTPLGSDVQLECQVEASPSPVSY-WLKGAR-- 280
            ..:.|   |:.|:|.        |:.:...:      ||:|...|...|..:.:|| ||...:  
 Worm   194 GNSTS---SI
DVRFTKATILDLIPLNKTVIE------GSNVFWHCHANAQATAISYSWLFEKKPI 249

  Fly   281 --TSNGFASVSTASLESGSPGPEMLLDGPKYGITERRDGYRGVMLLVVRSFSPSDVGTYHCVSTN 343
              ||.|..|    ::.||.                          |.::....||.|.|.|.:.|
 Worm   250 KTTSLGLRS----NIRSGD--------------------------LSLQDVRKSDSGWYTCEAKN 284

  Fly   344 SLGRAEGTLRLYEIKLHPGASASN 367
            |.|....:.....:...|...:|:
 Worm   285 SAGETTSSTAYLHVFYPPEPLSSH 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-gammaNP_651649.1 IG_like 47..139 CDD:214653 25/106 (24%)
Ig 47..129 CDD:299845 23/96 (24%)
Ig 140..238 CDD:299845 30/97 (31%)
IG_like 247..355 CDD:214653 24/112 (21%)
Ig 256..351 CDD:299845 24/99 (24%)
igcm-2NP_001362087.1 IG_like 23..101 CDD:214653 21/85 (25%)
Ig 124..200 CDD:386229 28/94 (30%)
IG_like 214..298 CDD:214653 25/119 (21%)
Ig_3 309..371 CDD:372822 85/349 (24%)
Ig 389..467 CDD:386229
FN3 476..548 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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