DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-gamma and Ncam2

DIOPT Version :9

Sequence 1:NP_651649.1 Gene:DIP-gamma / 43417 FlyBaseID:FBgn0039617 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_001106679.1 Gene:Ncam2 / 17968 MGIID:97282 Length:837 Species:Mus musculus


Alignment Length:359 Identity:86/359 - (23%)
Similarity:147/359 - (40%) Gaps:64/359 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KCGSGSTQNQHHESSSQLD--PDPEFIGFINNVTYPAGREAILACSVRNLGKNKVGWLRASDQTV 80
            :|.:...:.|..|::..|:  ....|...::...:..|.:|.:.|.|.:.....|.||..:::..
Mouse    92 RCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVT 156

  Fly    81 LALQGR--VVTHNARISVMHQDMHTWKLKISKLRESDRGCYMCQINTSPMKKQVGCID------- 136
            .....|  |:.:|             .|:|..:.:||.|.|.|:......    |.||       
Mouse   157 TIPDNRFAVLANN-------------NLQILNINKSDEGIYRCEGRVEAR----GEIDFRDIIVI 204

  Fly   137 VQVPPDIINEESSADLAVQEGEDATLTCKATGNPQPRVTWRREDGEMILIRKPGSRELMKVESYN 201
            |.|||.|:..:.|.:...:.||:.||||||:|:|.|.::|.| :|::|   :...:.::|     
Mouse   205 VNVPPAIMMPQKSFNATAERGEEMTLTCKASGSPDPTISWFR-NGKLI---EENEKYILK----- 260

  Fly   202 GSS--LRLLRLERRQMGAYLCIASNDVPPAVSKRVSLSVQFAPMVRAPSQLLG--TPLGSDVQLE 262
            ||:  |.:..:..:..|:|:|.|:|..... .|:..|.|...|.:   .||..  |.....|.|.
Mouse   261 GSNTELTVRNIINKDGGSYVCKATNKAGED-QKQAFLQVFVQPHI---LQLKNETTSENGHVTLV 321

  Fly   263 CQVEASPSPVSYWLKGARTSNGFASVSTASLESGSPGPEMLLDGPKYGITERRDGYRGVMLLVVR 327
            |:.|..|.|...|.:         ::.......|...|:        |..|.: |..|...|.:|
Mouse   322 CEAEGEPVPEITWKR---------AIDGVMFSEGDKSPD--------GRIEVK-GQHGRSSLHIR 368

  Fly   328 SFSPSDVGTYHCVSTNSLGRAEGTLRLYEIKLHP 361
            ....||.|.|.|.:.:.:|..:.::.| :|:..|
Mouse   369 DVKLSDSGRYDCEAASRIGGHQRSMHL-DIEYAP 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-gammaNP_651649.1 IG_like 47..139 CDD:214653 21/100 (21%)
Ig 47..129 CDD:299845 17/83 (20%)
Ig 140..238 CDD:299845 30/99 (30%)
IG_like 247..355 CDD:214653 24/109 (22%)
Ig 256..351 CDD:299845 21/94 (22%)
Ncam2NP_001106679.1 Ig1_NCAM-2 21..112 CDD:143274 4/19 (21%)
I-set 22..111 CDD:254352 4/18 (22%)
I-set 117..193 CDD:254352 18/88 (20%)
IGc2 128..189 CDD:197706 17/73 (23%)
Ig 208..301 CDD:299845 31/102 (30%)
I-set 215..298 CDD:254352 27/92 (29%)
Ig 300..397 CDD:299845 26/118 (22%)
IG_like 308..395 CDD:214653 22/104 (21%)
IG_like 413..491 CDD:214653
IGc2 414..482 CDD:197706
FN3 496..588 CDD:238020
fn3 594..678 CDD:278470
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 764..810
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

Return to query results.
Submit another query.