DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-gamma and Dscaml1

DIOPT Version :9

Sequence 1:NP_651649.1 Gene:DIP-gamma / 43417 FlyBaseID:FBgn0039617 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_001074739.2 Gene:Dscaml1 / 114873 MGIID:2150309 Length:2053 Species:Mus musculus


Alignment Length:352 Identity:78/352 - (22%)
Similarity:130/352 - (36%) Gaps:74/352 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SGSTQNQHHESSSQLDPD---PEFIGFINNVTYPAGREAILACSVRNLGKNKVGWLRASDQTVLA 82
            ||.|:..:....|..||.   |..:...::.....|....|.|:........:.||:        
Mouse   205 SGETRQSNGARLSVTDPAESIPTILDGFHSQEVWTGHSVELPCAASGYPIPAIRWLK-------- 261

  Fly    83 LQGRVVTHNARISVMHQDMHTWK-----LKISKLRESDRGCYMCQI-NTSPMKKQVGCIDVQVPP 141
             .||.:..::|          |.     |.||.||..|.|.|:|:: ||....:..|.:.|..|.
Mouse   262 -DGRPLPADSR----------WAKRITGLTISDLRTEDSGTYICEVTNTFGSAEANGILTVIDPL 315

  Fly   142 DIINEESSADLAVQEGEDATLTCKATGNPQPRVTWRREDGEMILIRKPGSRELMKVESYNGSSLR 206
            .:..........:  |....|:|..||:|:..:.|.| :.|::|   ||  |.:.:...:..:|.
Mouse   316 HVTLTPKKLKTGI--GSTVILSCALTGSPEFTIRWYR-NTELVL---PG--EAISIRGLSNETLL 372

  Fly   207 LLRLERRQMGAYLCIASNDVPPAVSKRVSLSVQFAP-MVRAPSQLLGTPLGSDVQLECQVEASPS 270
            :...::...|||.|.|:.....|....:.:.....| :|.:.|:.:..| |....|.|..:.:|.
Mouse   373 ISSAQKSHSGAYQCFATRKAQTAQDFAIIVLEDGTPRIVSSFSEKVVNP-GEQFSLMCAAKGAPP 436

  Fly   271 PVSYWL--------KGARTSNGFASVSTASLESGSPGPEMLLDGPKYGITERRDGYRGVMLLVVR 327
            |...|.        .|:..:|.:      ::..|:....|.:.||:.     |||          
Mouse   437 PTVTWALDDEPVVRDGSHRTNQY------TMSDGTTISHMNVTGPQI-----RDG---------- 480

  Fly   328 SFSPSDVGTYHCVSTNSLGRAEGTLRL 354
                   |.|.|.:.||:|.||...|:
Mouse   481 -------GVYRCTARNSVGSAEYQARI 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-gammaNP_651649.1 IG_like 47..139 CDD:214653 22/97 (23%)
Ig 47..129 CDD:299845 20/87 (23%)
Ig 140..238 CDD:299845 21/97 (22%)
IG_like 247..355 CDD:214653 26/116 (22%)
Ig 256..351 CDD:299845 23/102 (23%)
Dscaml1NP_001074739.2 IGc2 43..110 CDD:197706
Ig 125..218 CDD:353325 3/12 (25%)
I-set 226..311 CDD:336764 22/103 (21%)
Ig_3 317..389 CDD:339005 18/79 (23%)
Ig 408..498 CDD:353325 27/118 (23%)
IGc2 519..577 CDD:197706
Ig 615..681 CDD:319273
Ig_DSCAM 707..785 CDD:143211
Ig 803..891 CDD:353325
FN3 887..981 CDD:238020
FN3 988..1085 CDD:238020
FN3 1093..1186 CDD:238020
FN3 1191..1282 CDD:238020
Ig 1307..1377 CDD:319273
FN3 1384..1474 CDD:238020
FN3 1488..1560 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1716..1741
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1773..1803
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1840..1862
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1974..2053
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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