DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment DIP-gamma and adgrl1.1

DIOPT Version :9

Sequence 1:	NP_651649.1	Gene:	DIP-gamma / 43417	FlyBaseID:	FBgn0039617	Length:	413	Species:	Drosophila melanogaster
Sequence 2:	XP_002660669.2	Gene:	adgrl1.1 / 100334775	ZFINID:	ZDB-GENE-130116-2	Length:	390	Species:	Danio rerio

Alignment Length:	235	Identity:	50/235 - (21%)
Similarity:	87/235 - (37%)	Gaps:	68/235 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly   153 AVQEGEDATLTCKATGNPQPRVTWRREDGEM--------------ILIRKPGSRELMKVESYNGS 203
            ||:.||..:...:.|...||.:.   |.|:|              :.:.:|.|  :.:.|.::|:
Zfish    33 AVRLGETVSFQHRVTSRAQPGML---ESGKMNNQTLGVFVCPGTLVRVLEPSS--VREAEDHSGA 92

  Fly   204 SLRLLRLERRQMGAYLCIASNDVPPAVSKRVSLSVQFA-----------PMVRAPSQLLGTP-LG 256
            ..:    :..|.|..|.     |.|....|..:..::|           ...:.||::.||. :.
Zfish    93 WCK----DPLQAGDRLY-----VMPWTPYRTDMLYEYASWDDYIQNRVTTTYKLPSRVDGTGFVV 148

  Fly   257 SDVQLECQVEASPSPVSYWLKGARTSNGFASVSTASLESGSP---GPEMLLD--GPKYGI----- 311
            .|..:....|.:.:.|.|.|: .|..:|.|.:..|:....||   |.:..:|  ..::|:
Zfish   149 YDGAVFYNKERTRNIVKYDLR-TRIKSGEAVIVNANYHDASPYHRGGKSDIDLAVDEHGLWVIYT 212

  Fly   312 TERRDGYRGVMLLVVRSFSPSDVGTYHCVSTNSLGRAEGT 351
            ||..:|     .|||...:|..:            |.|||
Zfish   213 TEANNG-----RLVVSQVNPYTL------------RFEGT 235

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
DIP-gamma	NP_651649.1	IG_like	47..139	CDD:214653
		Ig	47..129	CDD:299845
		Ig	140..238	CDD:299845	20/98 (20%)
		IG_like	247..355	CDD:214653	29/116 (25%)
		Ig	256..351	CDD:299845	23/104 (22%)
adgrl1.1	XP_002660669.2	OLF	72..328	CDD:295358	40/193 (21%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D265311at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	1.010