DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11828 and AT3G28490

DIOPT Version :10

Sequence 1:NP_651648.5 Gene:CG11828 / 43416 FlyBaseID:FBgn0039616 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_189490.2 Gene:AT3G28490 / 822479 AraportID:AT3G28490 Length:288 Species:Arabidopsis thaliana


Alignment Length:242 Identity:62/242 - (25%)
Similarity:96/242 - (39%) Gaps:63/242 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 PVKLEQLNIEPFVGLFHDAISPAEQKDLLHLTDSRLEHRKKDSSSVEAKVDTNAS---------- 321
            |.::.||:..|...|:...:|..|...|:.|...:||     .|.|.|.||:..|          
plant    29 PTRITQLSWTPRAFLYKGFLSDEECDHLIKLAKGKLE-----KSMVVADVDSGESEDSEVRTSSG 88

  Fly   322 --------DHVRRIHQRIEDITGFDLEESEPLTVSNYGIGGQDFIHLDCEQPKEFIGYYPKE--- 375
                    |.|..:..::...|....|..|.|.:.:|..|.:...|.|.        :|.|:   
plant    89 MFLTKRQDDIVANVEAKLAAWTFLPEENGEALQILHYENGQKYDPHFDY--------FYDKKALE 145

  Fly   376 ---YRSASAMFYLSDVQMGGYASFPD------------------LGFGFKPRRGSALVWHNTDNS 419
               :|.|:.:.|||:|..||...||:                  .|:..|||:|.||::.|...:
plant   146 LGGHRIATVLMYLSNVTKGGETVFPNWKGKTPQLKDDSWSKCAKQGYAVKPRKGDALLFFNLHLN 210

  Fly   420 GNCDTRSLQATCPVLLGNQWVAKKWISGSGQWRRK--------SCRK 458
            |..|..||..:|||:.|.:|.|.:||......::|        ||::
plant   211 GTTDPNSLHGSCPVIEGEKWSATRWIHVRSFGKKKLVCVDDHESCQE 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11828NP_651648.5 P4Ha_N 1..128 CDD:462433
P4Hc 287..445 CDD:214780 52/199 (26%)
AT3G28490NP_189490.2 PLN00052 28..288 CDD:177683 62/242 (26%)
Blue background indicates that the domain is not in the aligned region.

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