DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11828 and Y43F8B.19

DIOPT Version :9

Sequence 1:NP_651648.5 Gene:CG11828 / 43416 FlyBaseID:FBgn0039616 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_001123044.2 Gene:Y43F8B.19 / 6418801 WormBaseID:WBGene00077688 Length:243 Species:Caenorhabditis elegans


Alignment Length:211 Identity:45/211 - (21%)
Similarity:78/211 - (36%) Gaps:49/211 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   268 VKLEQLNIEPFVGLFHDAISPAEQKDLLHLTDSRLEHRKKDSSSVEAKVDTNASDHVRRIHQR-- 330
            ||:|.:...|.:.::.|..:..:.:|.|.|    :||.|.:...|   |:.:.:|.|.:|.:.  
 Worm    22 VKVEVVAWRPGLVIYRDLFTGKQVRDHLEL----MEHLKFEEQLV---VNDDGNDIVSKIRRANG 79

  Fly   331 ----IED--------------ITGFDLEESEPLTVSNYGIGGQDFIHLDCEQPKEFIGY--YPKE 375
                .||              :...:.:.:|.:...:|..||....|.|         |  ||.|
 Worm    80 TQVFHEDHPAARSIWDTAKNLLPNLNFKTAEDILALSYNPGGHYAAHHD---------YLLYPSE 135

  Fly   376 -----------YRSASAMFYLSDVQMGGYASFPDLGFGFKPRRGSALVWHNTDNSGNCDTRSLQA 429
                       .|..:.:......:.||...||.||...:.:.|.|..|.|...:...:..|..|
 Worm   136 KEWDEWMRVNGNRFGTLIMAFGAAESGGATVFPRLGAAVRTKPGDAFFWFNAMGNSEQEDLSEHA 200

  Fly   430 TCPVLLGNQWVAKKWI 445
            .||:..|.:.::..|:
 Worm   201 GCPIYKGQKQISTIWL 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11828NP_651648.5 P4Ha_N 1..126 CDD:285528
P4Hc 287..445 CDD:214780 39/190 (21%)
Y43F8B.19NP_001123044.2 P4Hc 43..217 CDD:214780 40/190 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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