DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11828 and zgc:152670

DIOPT Version :9

Sequence 1:NP_651648.5 Gene:CG11828 / 43416 FlyBaseID:FBgn0039616 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_001070123.2 Gene:zgc:152670 / 557059 ZFINID:ZDB-GENE-060929-954 Length:490 Species:Danio rerio


Alignment Length:510 Identity:142/510 - (27%)
Similarity:221/510 - (43%) Gaps:106/510 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 EDELIGYMRQYAMELQHKVNTMRTF------QEEWMTRR-------ALG----PADPTSYVANPL 55
            |.|....:.|.:.....:.|.:.||      :||.:.:.       .||    |..|...:.:|:
Zfish    20 EQEFFSSVDQVSQLFNEEENLLDTFSLYIDAEEENLKKMKSLLLLLQLGSFSNPQSPEETMRDPV 84

  Fly    56 ISFPLMRR---TYTDVPKLLE--LAREEFKPGPFQKFIDYDLSSISDVE-LETAVTGMLRFQGVY 114
            .:|.|::|   .:.::.|..:  |.:|      ||..:||.|  |.::| :.:|..|::..|.:|
Zfish    85 AAFKLLKRLRHEWVNIAKFTQQSLYQE------FQTLLDYSL--IPELEDINSAALGLIGLQEIY 141

  Fly   115 GMDESEMANGKL--HGKQYNSRMSAADCLAVATHLENVDKGKLACKWFKVAIDQYEEKLDPVNRL 177
                      ||  |.....:.:||.:...:.......||.:.|..||          |..:|||
Zfish   142 ----------KLYPHNITKETPLSADEAYYIGLVAYEEDKFQHAFLWF----------LHSLNRL 186

  Fly   178 L---QTGRSQIYEKLGLTLLAMHDLPASQAAFRDSIGWASKEDNTDLA-KHLKDKLA-HMFVHVD 237
            .   .|.::.:...|..:......||.       :|.:..|..|.|.: :.:|.:|. :..:.:.
Zfish   187 TDFSSTTKNDLLRFLSSSAYQFGSLPV-------AIYFGQKLLNLDPSNEEIKVQLGLYRLIRLQ 244

  Fly   238 N--------------------CRG---KNLLPSKSYLRCRY-LRDGSPFLRMAPVKLEQLNIEPF 278
            .                    |||   :.....:..|.||| ...|:|.|..||||.|:|..||.
Zfish   245 RTSNPDIFTLNTQSNNSYEALCRGEVDERTSKRQRALSCRYSTGGGNPRLMYAPVKEEELWDEPK 309

  Fly   279 VGLFHDAISPAEQKDLLHLTDSRLEHRKKDSSSVEAKVDTNAS------DHVRRIHQRIEDITGF 337
            :..:||.||..|.:.|..:....|. |.:....|.:.:.|:.|      ..|.||.|||.||||.
Zfish   310 IIRYHDVISDTEIETLKDIARPELT-RSQTGWGVISDIRTSQSVFLEEVGTVARISQRIADITGL 373

  Fly   338 DLEESEPLTVSNYGIGGQDFIHLDC-EQPKEFIGYYPKEYRSASAMFYLSDVQMGGYASFPDLGF 401
            .:|.:|.|.|.||||||:...|.|. ::..|         |:|:.:.|:|||::||...|.::|.
Zfish   374 SVESAEKLHVQNYGIGGRYTPHFDTGDEVNE---------RTATFLIYMSDVEVGGATVFTNVGV 429

  Fly   402 GFKPRRGSALVWHNTDNSGNCDTRSLQATCPVLLGNQWVAKKWISGSGQWRRKSC 456
            ..||.:|||:.|:|...:|..|.::..|.||||:||:|||.|||...||..|:.|
Zfish   430 AVKPEKGSAVFWYNLHKNGELDLKTKHAGCPVLVGNKWVANKWIHEFGQEFRRPC 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11828NP_651648.5 P4Ha_N 1..126 CDD:285528 30/140 (21%)
P4Hc 287..445 CDD:214780 61/164 (37%)
zgc:152670NP_001070123.2 P4Ha_N 26..150 CDD:285528 31/141 (22%)
P4Hc 318..474 CDD:214780 62/165 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.920

Return to query results.
Submit another query.