DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11828 and PH4alphaPV

DIOPT Version :9

Sequence 1:NP_651648.5 Gene:CG11828 / 43416 FlyBaseID:FBgn0039616 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_733395.1 Gene:PH4alphaPV / 43640 FlyBaseID:FBgn0051015 Length:525 Species:Drosophila melanogaster


Alignment Length:511 Identity:150/511 - (29%)
Similarity:236/511 - (46%) Gaps:80/511 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASLLQIEDELIGYMRQYAMELQHKVNTMRTFQEEWMTRRALGPADPTSYVANPLISFPLMRR-- 63
            |..||.:|.:||..:..||:||:.|:.|:|..............:....|::|||.||.|:||  
  Fly    39 MVKLLDLEAQLIDNLEDYAVELEKKLQTVRRSITSLRLENDKARSSTEEYLSNPLNSFSLIRRMN 103

  Fly    64 -------TYTDVP-------KLLELAREEFKPGPFQKFIDYDLSSISDVELETAVTGMLRFQGVY 114
                   .|.|.|       ::.||  .|..|              :..::|.|||.:.|.|..|
  Fly   104 RDWIIWQLYMDDPVGISQVERIQEL--REHMP--------------THTDVEEAVTALDRIQSTY 152

  Fly   115 GMDESEMANGKLHGKQYNSRMSAADCLAVATHLENVDKGKLACKW----------FKVA----ID 165
            |:...|:::|.|:|||||..::..|..|:...|.:......|..|          |.:|    |.
  Fly   153 GLKVPEISHGFLNGKQYNVSLTVLDTYAMGQILFDQKNYLAAASWIYQSVVLMEAFSMAAPLEIS 217

  Fly   166 QYEEKLDPVNRLLQTGRSQIYEKLGLTLLAMHDLPAS-QAAFRDSIGWASKEDNTDLAKHLKDKL 229
            :.|.::.....||:.  :|..:.|.:..:|:.|.|.. :...:.|.........|:.|..:|.:.
  Fly   218 KNEVRMVYAETLLKL--NQHADALKVVNIALTDNPHDIKLLLKKSEIETMIRTGTNNAPPVKVQA 280

  Fly   230 AHM-FVHVDNCRGKNLLPSKSYLRCRYLRDGSPFLRMAPVKLEQLNIEPFVGLFHDAISPAEQKD 293
            ..: ..:...|||:....:.|.|.|.|.|..||||.:||:|:|.:.::|::.|:||.:||.|.|:
  Fly   281 TGVPTAYQIGCRGQFPPSADSKLYCLYNRTTSPFLILAPLKMELVGLDPYMVLYHDVLSPKEIKE 345

  Fly   294 LLHLTDSRLEHRK--KDSSSVEAKVDTNAS------DHVR----RIHQRIEDITGFDLEESEPLT 346
            |..:....|:...  :.||.....|.|..|      |...    |::.||.|:|||:|..||.|.
  Fly   346 LQGMATPGLKRATVYQASSGRNEVVKTRTSKVAWFPDGYNPLTVRLNARISDMTGFNLYGSEMLQ 410

  Fly   347 VSNYGIGGQDFIHLDCEQPKEFIGYYPKEY---------RSASAMFYLSDVQMGGYASFPDLGFG 402
            :.|||:||....|.|         ::.|..         |.|:.:|||:||:.||...||::...
  Fly   411 LMNYGLGGHYDQHYD---------FFNKTNSNMTAMSGDRIATVLFYLTDVEQGGATVFPNIRKA 466

  Fly   403 FKPRRGSALVWHNTDNSGNCDTRSLQATCPVLLGNQWVAKKWISGSGQWRRKSCRK 458
            ..|:|||.::|:|..::|..||::|.|.|||::|::||..|||....|...:.|.|
  Fly   467 VFPQRGSVVMWYNLKDNGQIDTQTLHAACPVIVGSKWVCNKWIREREQIFSRPCLK 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11828NP_651648.5 P4Ha_N 1..126 CDD:285528 39/140 (28%)
P4Hc 287..445 CDD:214780 60/178 (34%)
PH4alphaPVNP_733395.1 P4Ha_N 35..164 CDD:285528 39/140 (28%)
TPR_11 179..250 CDD:290150 14/72 (19%)
TPR repeat 179..213 CDD:276809 6/33 (18%)
TPR repeat 218..248 CDD:276809 6/31 (19%)
P4Hc 339..510 CDD:214780 61/179 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461837
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
98.900

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