DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11828 and PH4alphaNE2

DIOPT Version :10

Sequence 1:NP_651648.5 Gene:CG11828 / 43416 FlyBaseID:FBgn0039616 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_733378.1 Gene:PH4alphaNE2 / 43628 FlyBaseID:FBgn0039783 Length:542 Species:Drosophila melanogaster


Alignment Length:525 Identity:159/525 - (30%)
Similarity:230/525 - (43%) Gaps:106/525 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASLLQIEDELIGYMRQYAMELQHKVNTMRTFQEEW----MTRRALGPADPTSYVANPLISFPLM 61
            |..:|.:||:|:..:.:.|..|..|..|::     |    |.:|...........|||:.:|.|:
  Fly    37 MDDMLNLEDDLVSNVEKLAEALARKAKTIK-----WGVFKMMKRRQEYKSSMEIFANPIDTFSLI 96

  Fly    62 RR---------TYTDVPKLLELAREE---------FKPGPFQKFIDYDLSSISDVELETAVTGML 108
            |.         .|.:.|    :.:||         ..|..|. |||             |..|:.
  Fly    97 RHMQSNWLMWLLYLETP----VGQEELFFVDSRMPLLPKYFD-FID-------------AAEGIR 143

  Fly   109 RFQGVYGMDESEMANGKLHGKQYNSRMSAADCLAVATHLENVDKGKLACKWFKVAIDQYEEKLDP 173
            :.|..|.|..|::|.|.|.|.||||.:...||||:..||.|..:...|.:|...:|:.|::|...
  Fly   144 KMQATYQMFSSDIAKGLLDGVQYNSSLKPIDCLAIGLHLMNNSRWYAAEQWISASIEAYDQKSSQ 208

  Fly   174 VNRLLQTG--RSQIYEKLGLTLLAMHD----LPASQAAFR---------DSIGWASKEDNT--DL 221
            .:..|..|  .:.:...||...:...:    |.|.|.|.:         :......|.|.|  |:
  Fly   209 TDMELLRGPKLADLCRILGQVQMKQRNHEGALQAYQVALKLSPHDPEIYEEYRILEKRDLTLSDI 273

  Fly   222 AKHLKDKLAHMFVHVDN----------CRGKNLLP-SKSYLRCRYLRDGSPFLRMAPVKLEQLNI 275
            ....:||        ||          |.|:..:| :.|.|.|.|....||||::||:|.|.|:|
  Fly   274 EPIEQDK--------DNSHERLVLPPCCSGRCQVPRNLSNLYCVYNHVTSPFLQLAPIKTEILSI 330

  Fly   276 EPFVGLFHDAISPAEQKDLLHLTDSRLEH------RKKDSSSVEAKVDT-----------NASDH 323
            :|||.|.||.||   ||:...:..|..||      ...|:|..|.:|||           :.:|.
  Fly   331 DPFVVLLHDMIS---QKESTLIRTSSKEHMLPSATTDPDASDDETQVDTYRTSKSVWYSSDFNDT 392

  Fly   324 VRRIHQRIEDITGFDLEESEPLTVSNYGIGGQDFIHLD--CEQPKEFIGYYPKEYRSASAMFYLS 386
            .::|.:|:.|.||.|:..:|...|.|||:||....|||  ..:...|.|   ...|.|:.:|||:
  Fly   393 TKKITERLGDATGLDMNSTEFYQVINYGLGGFFETHLDMLLSEKNRFNG---TSDRIATTLFYLN 454

  Fly   387 DVQMGGYASFPDLGFGFKPRRGSALVWHNTDNSGNCDTRSLQATCPVLLGNQWVAKKWISGSGQW 451
            :|:.||...||.|.....|:.||||.|:|.|..||....||...|||::|::||..|||:..||.
  Fly   455 EVRQGGGTYFPRLNLTVFPQPGSALFWYNLDTKGNDHMGSLHTGCPVIVGSKWVMSKWINDMGQE 519

  Fly   452 RRKSC 456
            ..:.|
  Fly   520 FTRPC 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11828NP_651648.5 P4Ha_N 1..128 CDD:462433 36/148 (24%)
P4Hc 287..445 CDD:214780 61/176 (35%)
PH4alphaNE2NP_733378.1 P4Ha_N 33..163 CDD:462433 36/148 (24%)
TPR repeat 175..200 CDD:276809 8/24 (33%)
TPR_16 176..254 CDD:433202 18/77 (23%)
NrfG 217..>260 CDD:443378 6/42 (14%)
TPR repeat 219..249 CDD:276809 6/29 (21%)
P4Hc 342..513 CDD:214780 61/176 (35%)

Return to query results.
Submit another query.