DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11828 and PH4alphaNE1

DIOPT Version :9

Sequence 1:NP_651648.5 Gene:CG11828 / 43416 FlyBaseID:FBgn0039616 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_733374.1 Gene:PH4alphaNE1 / 43625 FlyBaseID:FBgn0039780 Length:537 Species:Drosophila melanogaster


Alignment Length:507 Identity:146/507 - (28%)
Similarity:231/507 - (45%) Gaps:62/507 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ASLLQIEDELIGYMRQY-AMELQHKVNTMRTFQEEWMT-------RRALGPADPTSYVANPLISF 58
            :|:..:||.|  :..|| ..||:.|||.::|..::..:       ...:..:|..:|:.||:..:
  Fly    25 SSITGLEDLL--HTEQYLTRELRSKVNAIQTALQQLESELSSIEKEHTMAASDTENYLTNPVNVY 87

  Fly    59 PLMRRTYTD---VPKLLELAREEFKPGPFQKFIDYDLSSISDVELETAVTGMLRFQGVYGMDESE 120
            .||:|.:||   :...::|..||..   |....:|.||..|..::|.|...::|.|..|.:|.::
  Fly    88 RLMKRLHTDWSLMEGRVQLMAEEMN---FNATREYGLSYPSQEDVEGAALALVRLQSTYKLDVAQ 149

  Fly   121 MANGKLHGKQYNSRMSAADCLAVATHLENVDKGKLACKWFKVAIDQYEEKLD--PVNRLLQTGRS 183
            :|.|.|:|.:|.|.||..||..:...|..::.......|.:.::::...:..  |.:....:|..
  Fly   150 VAQGILNGVKYGSDMSWQDCFELGQQLFEMEDYNNTKVWLRESMERLRRQTSHAPSHLAPTSGPD 214

  Fly   184 QI-YEKLGLTLLAMHDLPASQAAFRDS------------------IGWASKEDNTD--LAKHLKD 227
            .: ..|:..|..::..|.....||..|                  .|.|..||..|  |.||...
  Fly   215 TVTLNKMEATAKSLFQLGDFDTAFELSQRVLQFDPKRIRNWHLGDKGTAPPEDIDDVYLPKHSDS 279

  Fly   228 -KLAHMFVHVDN-CRGKNLLPSKSYLRCRYLRDGSPFLRMAPVKLEQLNIEPFVGLFHDAISPAE 290
             .|:..|...:. |||:.....:..|||||.|...|:..:||:|||:.:::|:|..|||.:||.:
  Fly   280 YSLSQEFAKYEKVCRGEVHPIVRQELRCRYSRGNHPYRFLAPLKLEEHSLDPYVATFHDILSPGK 344

  Fly   291 QKDLLHLTDSRLEHR-----------KKDSSSVEAKVDTNASDHVRRIH--QRIEDITGFDLEES 342
            ...|..:...|: ||           ||.:..|..........|...:.  :.::|.||.|....
  Fly   345 ISQLREMAVPRM-HRSTVNPLPGGQLKKSAFRVSKNAWLAYESHPTMVGMLRDLKDATGLDTTFC 408

  Fly   343 EPLTVSNYGIGGQDFIHLD-CEQPKEFIGYYPKE--YRSASAMFYLSDVQMGGYASFPDLGFGFK 404
            |.|.|:|||:||....|.| ...|    .:||.|  .|.|:|:||||:|:.||..:||.|....|
  Fly   409 EQLQVANYGVGGHYEPHWDFFRDP----NHYPAEEGNRIATAIFYLSEVEQGGATAFPFLDIAVK 469

  Fly   405 PRRGSALVWHNTDNSGNCDTRSLQATCPVLLGNQWVAKKWISGSGQWRRKSC 456
            |:.|:.|.|:|...|.:.|.|:..|.||||.|::|:...||....|...:.|
  Fly   470 PQLGNVLFWYNLHRSLDKDYRTKHAGCPVLKGSKWIGNVWIHEVTQTFARPC 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11828NP_651648.5 P4Ha_N 1..126 CDD:285528 37/134 (28%)
P4Hc 287..445 CDD:214780 57/173 (33%)
PH4alphaNE1NP_733374.1 P4Ha_N 26..155 CDD:285528 37/133 (28%)
P4Hc 341..511 CDD:214780 58/174 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461846
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
98.900

Return to query results.
Submit another query.