DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11828 and PH4alphaSG2

DIOPT Version :9

Sequence 1:NP_651648.5 Gene:CG11828 / 43416 FlyBaseID:FBgn0039616 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster


Alignment Length:521 Identity:141/521 - (27%)
Similarity:228/521 - (43%) Gaps:104/521 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASLLQIEDELIGYMRQYAMELQHKVNTMRTFQE------EWMTRRALGPADPTSYVANPLISFP 59
            |..|.|:|:||:...|.|....|.:::..|.:.|      ||.|.:    .....|:.:||.:|.
  Fly    32 MQDLAQVEEELLNATRSYVESQQKQLDFYRRYVEQIKREHEWATSQ----LKLDDYLGHPLHAFR 92

  Fly    60 LMRRTYTD------VPKLLELAREEFKPGPFQKFIDYDLSSISDVELETAVTGMLRFQGVYGMDE 118
            |::|...|      .|.|...|||||:  .|.:.:..||......||:.|:.|:.|.|.||.:..
  Fly    93 LIKRLVRDWDSLIFEPILANNAREEFR--AFVEVLSRDLGYPDQSELQGAIKGLARLQKVYNLAT 155

  Fly   119 SEMANGKLHGKQYNSRMSAADCLAVATHLENVDKGKLACKWFKVAI-------------DQY--- 167
            |::|:|.:.|..|.|.:...:|..:...|.::.:.:.:.:|.:||.             |.|   
  Fly   156 SDLADGIIGGLNYGSDLRWRECYEIGVQLFDLGEYQRSLEWLQVAFILLRNSPREEKDADHYLSD 220

  Fly   168 -EEKLDPVN----------RLLQTGRSQIYEKLGLTLLAMHDLPASQAAFRDSIGWASKEDNTDL 221
             .|.....|          |||    |||.|.     ...|....:|......:.          
  Fly   221 IREYASMANFELGNPKKAARLL----SQILES-----QPTHSAQQTQKYLESRVP---------- 266

  Fly   222 AKHLKDKLAHMFVHVDN-CRGKNLLPSKS--YLRCRYLRDGS--PFLRMAPVKLEQLNIEPFVGL 281
            .|::::.....|.:... |:|:.|...:|  .||| || ||.  .:..:||:::|.::::|.:.:
  Fly   267 GKNVQETKPSWFSNYTRLCQGRRLPEERSGDPLRC-YL-DGKRHAYFTLAPLQVEPVHLDPDINV 329

  Fly   282 FHDAISPAEQKDLLHLTDSRLEHRKKDSSSVEAKVDTNASDHVR--RIHQR-------------- 330
            :|..:|   .|.:|    |..|...|:.....|...:.....||  |:.|:              
  Fly   330 YHGMLS---SKQIL----SIFEEADKEEMVRSAVAGSGGEGTVRDLRVSQQTWLDYKSPVMNSVG 387

  Fly   331 --IEDITGFDLEESEPLTVSNYGIGGQDFIHLD---CEQPKEFIGYYPKEYRSASAMFYLSDVQM 390
              |:.::|||:..:|.:.|:|||:|||...|.|   ...||.|.|     .|.:::|||||||:.
  Fly   388 RIIQFVSGFDMAGAEHMQVANYGVGGQYEPHPDYFEVNLPKNFEG-----DRISTSMFYLSDVEQ 447

  Fly   391 GGYASFPDLGFGFKPRRGSALVWHNTDNSGNCDTRSLQATCPVLLGNQWVAKKWISGSGQWRRKS 455
            |||..|..|.....|.:|:.::|||...|.:.|.|:|.|.|||::|::.:...|:....|..|:.
  Fly   448 GGYTVFTKLNVFLPPVKGALVMWHNLHRSLHVDARTLHAGCPVIVGSKRIGNIWMHSGYQEFRRP 512

  Fly   456 C 456
            |
  Fly   513 C 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11828NP_651648.5 P4Ha_N 1..126 CDD:285528 42/136 (31%)
P4Hc 287..445 CDD:214780 56/178 (31%)
PH4alphaSG2NP_651801.1 P4Ha_N 28..163 CDD:285528 42/136 (31%)
P4Hc 335..503 CDD:214780 57/179 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461840
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
98.900

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