DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11828 and PH4alphaEFB

DIOPT Version :10

Sequence 1:NP_651648.5 Gene:CG11828 / 43416 FlyBaseID:FBgn0039616 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_733371.1 Gene:PH4alphaEFB / 43620 FlyBaseID:FBgn0039776 Length:550 Species:Drosophila melanogaster


Alignment Length:530 Identity:154/530 - (29%)
Similarity:232/530 - (43%) Gaps:96/530 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASLLQIEDELIGYMRQYAMELQHKVNTMRTFQEEWMTRRALGPADPTSYVANPLISFPLMRRTY 65
            |..||:.|..||..:..|....:.|:|.::...:|:....:....|.|:||:||:.::.|.:|..
  Fly    32 MEELLETESVLITNLEGYIRVQEDKLNFLKNKMDEYQREHSDASHDITAYVSNPINAYLLTKRLT 96

  Fly    66 TDVPKLLELAREEFKPGPFQKFIDYD--LSSISDVELETAVTGMLRFQGVYGMDESEMANGKLHG 128
            ||..::..|...:......|....|.  |...||.:|..|...:||.|..|.:|.|.:|.|||:|
  Fly    97 TDWRQVENLMEHDVGTDFLQNITQYRSLLKFPSDEDLNGAAVALLRLQDTYQLDTSSVARGKLNG 161

  Fly   129 KQYNSRMSAADCLAV----------------------------ATHLENVDKGK----LACKWFK 161
            .||::.||:.||..:                            ..|.::..|..    ||...:|
  Fly   162 IQYSTEMSSDDCFELGRQSYVNHDYYHTVLWMNEAMARMLEEPTNHTQSFTKADILEYLAFSTYK 226

  Fly   162 VAIDQYEEKLDPVNRLLQ--------TGRSQIYEKLGLTLLAMHDLPASQAAFRDSIGWASKEDN 218
            ..  ..|..|...|.|||        .|..:.|||         :: |.|...|...|    :|.
  Fly   227 EG--NIESALTMTNELLQLLPHHERANGNKRFYEK---------EI-AQQLQLRKMKG----DDG 275

  Fly   219 TD--------LAK------HLKDKLAHMFVHVDNCRGKNLLPSKS---YLRCRYLRDGSPFLRMA 266
            ||        :||      .:.::.|:..:    |||: |.||.|   .|||||:.:..||||:.
  Fly   276 TDEMPKSDLPVAKSDPAIFDMTERRAYEML----CRGE-LKPSPSDLRSLRCRYVTNRVPFLRLG 335

  Fly   267 PVKLEQLNIEPFVGLFHDAISPAEQKDLLHLTDSRLEHRKKDSS------------SVEAKVDTN 319
            |:|||:::.:|::.::|||:..:|...:..:...|.......:|            |..|.:.|.
  Fly   336 PLKLEEVHADPYIVIYHDAMYDSEIDLIKRMARPRFRRATVQNSVTGALETANYRISKSAWLKTQ 400

  Fly   320 ASDHVRRIHQRIEDITGFDLEESEPLTVSNYGIGGQDFIHLDC---EQPKEFIGYYPKEYRSASA 381
            ....:..:.||..|:||.|::.:|.|.|.||||||....|.|.   |:.:.|.|..... |.|:.
  Fly   401 EDRVIETVVQRTADMTGLDMDSAEELQVVNYGIGGHYEPHFDFARKEEQRAFEGLNLGN-RIATV 464

  Fly   382 MFYLSDVQMGGYASFPDLGFGFKPRRGSALVWHNTDNSGNCDTRSLQATCPVLLGNQWVAKKWIS 446
            :||:|||:.||...|..|.....|::|:|..|.|....|..|.|:..|.||||.|.:||:.|||.
  Fly   465 LFYMSDVEQGGATVFTSLHTALFPKKGTAAFWMNLHRDGQGDVRTRHAACPVLTGTKWVSNKWIH 529

  Fly   447 GSGQWRRKSC 456
            ..||..|:.|
  Fly   530 ERGQEFRRPC 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11828NP_651648.5 P4Ha_N 1..128 CDD:462433 38/128 (30%)
P4Hc 287..445 CDD:214780 54/172 (31%)
PH4alphaEFBNP_733371.1 P4Ha_N 28..161 CDD:462433 38/128 (30%)
P4Hc 356..529 CDD:214780 55/173 (32%)

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