DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11828 and p4ha2

DIOPT Version :9

Sequence 1:NP_651648.5 Gene:CG11828 / 43416 FlyBaseID:FBgn0039616 Length:458 Species:Drosophila melanogaster
Sequence 2:XP_005173949.1 Gene:p4ha2 / 373132 ZFINID:ZDB-GENE-030827-1 Length:542 Species:Danio rerio


Alignment Length:541 Identity:149/541 - (27%)
Similarity:239/541 - (44%) Gaps:118/541 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASLLQIEDELIGYMRQYAMELQHKVNTMRTFQEEWMTRRALGPADPTSYVANPLISFPLMRRTY 65
            |.:|:..|.||:..:::|....:.|:.|:|::..:.........:||..::|:|:.::.||:|..
Zfish    29 MTNLIFTERELVQSLKEYIQAEEQKLETVRSWANKLDKLTRTSTSDPEGFLAHPVNAYKLMKRLN 93

  Fly    66 TDVPKLLELAREEFKPGPFQKFIDYDLSSIS-------DVELET-AVTGMLRFQGVYGMDESEMA 122
            |:..:|..|..::    |...||    |::|       |.|.|. |...:||.|..|.:|....:
Zfish    94 TEWSELESLVLQD----PSDGFI----SNMSVHRQYFPDEEDEKGAAKALLRLQDTYKLDAESFS 150

  Fly   123 NGKLHGK------QYNSRMSAADCLAVATHLENVDKGKLACK---------WFKVAIDQYEEKLD 172
            .|||.|:      :||:.::..||.         |.||:|..         |.:.::.|.:.   
Zfish   151 KGKLPGQRQHSGVRYNALLTVDDCF---------DMGKMAYNDNDYYHSVLWMQQSLRQMDS--- 203

  Fly   173 PVNRLLQTGRSQIYEKLGLTLLAMHDL--------------PASQAA--------------FRDS 209
              ....:|.::.:.:.|..::..|.||              |:.|.|              .:||
Zfish   204 --GEEAKTPKADVLDYLSYSVYQMGDLPRAIELTRRLLAIDPSHQRAGGNLRYFERLLSKELQDS 266

  Fly   210 IGWASKED------NTDLAKHLKDKLAHMFVHVDNCRG---KNLLPSKSYLRCRYLRDG--SPFL 263
             |....|.      ..|..:..||.|.....:...|||   |.....:|.|.||| |||  :|.|
Zfish   267 -GQTQPEPADERPIQLDTYQRPKDYLPEREAYEALCRGEGVKMTTKRQSRLFCRY-RDGNRNPRL 329

  Fly   264 RMAPVKLEQLNIEPFVGLFHDAISPAEQKDLLHLTDSRL----------------EHRKKDSSSV 312
            .:.|:|.|.....|.:..|.:|:|..|.:.:..:...:|                .:|...|:.:
Zfish   330 LLKPMKEEDEWDSPHIVRFLEALSDEEIQKIKEIATPKLARATVRDPKTGVLTVAHYRVSKSAWL 394

  Fly   313 EAKVDTNASDHVRRIHQRIEDITGFDLEESEPLTVSNYGIGGQDFIHLDCEQPKEFIGYYPKEYR 377
            |.:.|    ..:.|::||||||||..::.:|.|.|:|||:|||...|.|..:..|     |..::
Zfish   395 EGEDD----PVIARVNQRIEDITGLTVDTAELLQVANYGVGGQYEPHFDFSRKDE-----PDAFK 450

  Fly   378 S-------ASAMFYLSDVQMGGYASFPDLGFGFKPRRGSALVWHNTDNSGNCDTRSLQATCPVLL 435
            |       |:.:.|:|||:.||...|||.|....||:|:|:.|:|...||..|.|:..|.||||:
Zfish   451 SLGTGNRVATYLNYMSDVEAGGATVFPDFGASVWPRKGTAVFWYNLFRSGEGDYRTRHAACPVLV 515

  Fly   436 GNQWVAKKWISGSGQWRRKSC 456
            |::||:.|||...||..|:.|
Zfish   516 GSKWVSNKWIHERGQEFRRPC 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11828NP_651648.5 P4Ha_N 1..126 CDD:285528 34/132 (26%)
P4Hc 287..445 CDD:214780 60/180 (33%)
p4ha2XP_005173949.1 P4Ha_N 25..154 CDD:285528 34/132 (26%)
P4Hc 353..526 CDD:214780 61/181 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.920

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