DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11828 and P4ha3

DIOPT Version :9

Sequence 1:NP_651648.5 Gene:CG11828 / 43416 FlyBaseID:FBgn0039616 Length:458 Species:Drosophila melanogaster
Sequence 2:XP_038938408.1 Gene:P4ha3 / 361612 RGDID:735150 Length:549 Species:Rattus norvegicus


Alignment Length:470 Identity:115/470 - (24%)
Similarity:190/470 - (40%) Gaps:102/470 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASLLQIEDELIGYMRQYAMELQHKVNTMRTFQEEWMTRRALGPADPTSYVANPLISFPLMRRTY 65
            :|..|..|..|:|.:|:|....:.::..:..|.::.::..    .|....|.|||::|.|::|..
  Rat    37 VARALAPERRLLGTLRRYLRGEEARLRDLTRFYDKVLSLH----EDLKIPVVNPLLAFTLIKRLQ 97

  Fly    66 TD---VPKLLELAR--EEFKPGPFQKFIDYDLSSISDVELETAVTGMLRFQGVYGMDESEMANG- 124
            :|   |...||...  ...|.| ::| ::.||.:..|  ||.|...::|.|.||.::...:|.| 
  Rat    98 SDWRNVVHSLEATENIRALKDG-YEK-VEQDLPAFED--LEGAARALMRLQDVYMLNVKGLAQGV 158

  Fly   125 --KLHGKQ----YNSR----MSAADCLAVATHLENVDKGKLACKWFKVAIDQY------------ 167
              ::.|..    |:.|    ::|.||..|.....:......|..|.:.|:..:            
  Rat   159 FQRVTGSSITDLYSPRQLFSLTADDCFQVGKVAYDTGDYYHAIPWLEEAVSLFRRSYGEWKTEDE 223

  Fly   168 ---EEKLD--------------------------PVNRLLQTGRSQI-YEKLGLTLLAM--HDLP 200
               |:.||                          |.|:  :..|:.: ||:    |||.  |.:.
  Rat   224 ASLEDALDYLAFACYQVGNVSCALSLSREFLVYSPDNK--RMARNVLKYER----LLAENGHLMA 282

  Fly   201 ASQAAFRDSIGWASKEDNTD-LAKHLKDKLAHMFVHVDNCRGKNLLPSKSYLRCRYLRDGSPFLR 264
            |..|..|.::......|..: |.:.|..:..|.           .:||   |.|.|..:.||:|.
  Rat   283 AETAIQRPNVPHLQTRDTYEGLCQTLGSQPTHY-----------QIPS---LYCSYETNSSPYLL 333

  Fly   265 MAPVKLEQLNIEPFVGLFHDAISPAEQKDLLHLTDSRLEHRKKDSSSVEAKVDTNAS-------- 321
            :.|.:.|.:::.|.|.|:||.:|..|.:.:..|.:..|:.....|...:.:|:...|        
  Rat   334 LQPARKEVIHLRPLVALYHDFVSDEEAQKIRELAEPWLQRSVVASGEKQLQVEYRISKSAWLKDT 398

  Fly   322 -DHVR-RIHQRIEDITGFDLEE--SEPLTVSNYGIGGQDFIHLD-CEQPKEFIGYYPKEYRSASA 381
             |.|. .:.:||..:||.|::.  :|.|.|.||||||....|.| ...|...:.......|.|:.
  Rat   399 VDPVLVTLDRRIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYKMKSGNRVATL 463

  Fly   382 MFYLSDVQMGGYASF 396
            |.|||.|:.||..:|
  Rat   464 MIYLSSVEAGGATAF 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11828NP_651648.5 P4Ha_N 1..126 CDD:285528 35/132 (27%)
P4Hc 287..445 CDD:214780 36/123 (29%)
P4ha3XP_038938408.1 P4Ha_N 34..108 CDD:400573 18/74 (24%)
P4Hc 356..>478 CDD:214780 35/121 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343168
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X129
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

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