DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11828 and P4ha2

DIOPT Version :9

Sequence 1:NP_651648.5 Gene:CG11828 / 43416 FlyBaseID:FBgn0039616 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_001101745.1 Gene:P4ha2 / 360526 RGDID:1309673 Length:535 Species:Rattus norvegicus


Alignment Length:524 Identity:133/524 - (25%)
Similarity:234/524 - (44%) Gaps:92/524 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASLLQIEDELIGYMRQYAMELQHKVNTMRTFQEEWMTRRALGPADPTSYVANPLISFPLMRRTY 65
            |..|:..|.:|:..:::|.:..:.|::.::::..:.....:...|||..|:|:|:.::.|::|..
  Rat    30 MTDLIYAEKDLVQSLKEYILAEEAKLSKIKSWASKMEALTSKSAADPEGYLAHPVNAYKLVKRLN 94

  Fly    66 TDVPKLLELAREEFKPGPFQKFIDYDLSSIS--------DVELETAVTGMLRFQGVYGMDESEMA 122
            ||.|.|.:|..::...|    |:    :::|        |.:...|...::|.|..|.:|...::
  Rat    95 TDWPALGDLVLQDAAAG----FV----ANLSVQRQFFPTDEDESGAARALMRLQDTYKLDPDMIS 151

  Fly   123 NGKLHGKQYNSRMSAADCLAVATH-----------------LENVDKGK-------LACKWFKVA 163
            .|:|.|.:|.:.:|..||..:...                 |:.:|.|:       |...:...|
  Rat   152 RGELPGTKYQAMLSVDDCFGMGRSAYNEGDYYHTVLWMEQVLKQLDAGEEATVTKSLVLDYLSYA 216

  Fly   164 IDQ---YEEKLDPVNRLLQT--------GRSQIYEKLGLTLLAMHDLPASQAAFRDSIGWASKED 217
            :.|   ....::...|||..        |..:.:|:|      :.:......:.:...|.||:| 
  Rat   217 VFQLGDLHRAVELTRRLLSLDPSHERAGGNLRYFERL------LEEERGKSLSNQTDAGLASQE- 274

  Fly   218 NTDLAKHLKDKLAHMFVHVDNCRGKNLLPS---KSYLRCRYLRDGS--PFLRMAPVKLEQLNIEP 277
              :|.:...|.|....|:...|||:.:..:   :..|.||| ..|:  |.|.:||.|.|.....|
  Rat   275 --NLYERPVDYLPERDVYESLCRGEGIKMTPRRQKRLFCRY-HHGNRVPQLLIAPFKEEDEWDSP 336

  Fly   278 FVGLFHDAISPAEQKDLLHLTDSRL----------------EHRKKDSSSVEAKVDTNASDHVRR 326
            .:..::|.:|..|.:.:..:...:|                .:|...||.:|...|    ..|.|
  Rat   337 HIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDD----PVVAR 397

  Fly   327 IHQRIEDITGFDLEESEPLTVSNYGIGGQDFIHLDCEQPKEFIGYYPKEY----RSASAMFYLSD 387
            :::|::.|||..::.:|.|.|:|||:|||...|.|..:..|...:  |..    |.|:.:.|:||
  Rat   398 VNRRMQHITGLTVKTAELLQVANYGMGGQYEPHFDFSRSDERDAF--KRLGTGNRVATFLNYMSD 460

  Fly   388 VQMGGYASFPDLGFGFKPRRGSALVWHNTDNSGNCDTRSLQATCPVLLGNQWVAKKWISGSGQWR 452
            |:.||...|||||....|::|:|:.|:|...||..|.|:..|.||||:|.:||:.||....||..
  Rat   461 VEAGGATVFPDLGAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKWVSNKWFHERGQEF 525

  Fly   453 RKSC 456
            .:.|
  Rat   526 LRPC 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11828NP_651648.5 P4Ha_N 1..126 CDD:285528 29/132 (22%)
P4Hc 287..445 CDD:214780 58/177 (33%)
P4ha2NP_001101745.1 P4Ha_N 27..104 CDD:400573 18/73 (25%)
P4Hc 346..519 CDD:214780 59/178 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X129
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.920

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