DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11828 and P4ha3

DIOPT Version :9

Sequence 1:NP_651648.5 Gene:CG11828 / 43416 FlyBaseID:FBgn0039616 Length:458 Species:Drosophila melanogaster
Sequence 2:XP_006508007.1 Gene:P4ha3 / 320452 MGIID:2444049 Length:551 Species:Mus musculus


Alignment Length:554 Identity:141/554 - (25%)
Similarity:222/554 - (40%) Gaps:141/554 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASLLQIEDELIGYMRQYAMELQHKVNTMRTFQEEWMTRRALGPADPTSYVANPLISFPLMRRTY 65
            :|..|..|..|:|.:|:|....:.::..:..|.::.::..    .|....|.|||::|.|::|..
Mouse    35 VARALAPERRLLGTLRRYLRGEEARLRDLTRFYDKVLSLH----EDLKIPVVNPLLAFTLIKRLQ 95

  Fly    66 TD---VPKLLELAR--EEFKPGPFQKFIDYDLSSISDVELETAVTGMLRFQGVYGMDESEMANG- 124
            :|   |...||...  ...|.| ::| ::.||.:..|  ||.|...::|.|.||.::...:|.| 
Mouse    96 SDWRNVVHSLEATENIRALKDG-YEK-VEQDLPAFED--LEGAARALMRLQDVYMLNVKGLARGV 156

  Fly   125 --KLHGKQ----YNSR----MSAADCLAVATHLENVDKGKLAC------------------KWFK 161
              ::.|..    |:.|    ::|.||..|         ||.:|                  .|.:
Mouse   157 FQRVTGSSITDLYSPRQLFSLTADDCFQV---------GKPSCGSRSLQVAYDTGDYYHAIPWLE 212

  Fly   162 VAIDQY---------------EEKLD--------------------------PVNRLLQTGRSQI 185
            .|:..:               |:.||                          |.|:  :..|:.:
Mouse   213 EAVSLFRRAHGEWKTEDEASLEDALDYLAFACFQVGNVSCALSLSREFLVYSPDNK--RMARNVL 275

  Fly   186 -YEKLGLTLLAM--HDLPASQAAFRDSIGWASKEDNTD-LAKHLKDKLAHMFVHVDNCRGKNLLP 246
             ||:    |||.  |.:.|..|..|.::......|..: |.:.|..:..|.           .:|
Mouse   276 KYER----LLAENGHQMAAETAIQRPNVPHLQTRDTYEGLCQTLGSQPTHY-----------QIP 325

  Fly   247 SKSYLRCRYLRDGSPFLRMAPVKLEQLNIEPFVGLFHDAISPAEQKDLLHLTDSRLEHRKKDSSS 311
            |   |.|.|..:.||:|.:.|.:.|.:::.|.:.|:||.:|..|.:.:..|.:..|:.....|..
Mouse   326 S---LYCSYETNSSPYLLLQPARKEVVHLRPLIALYHDFVSDEEAQKIRELAEPWLQRSVVASGE 387

  Fly   312 VEAKVDTNAS----------------DHVRRIHQRIEDITGFDLEE--SEPLTVSNYGIGGQDFI 358
            .:.:|:...|                ||      ||..:||.|::.  :|.|.|.||||||....
Mouse   388 KQLQVEYRISKSAWLKDTVDPMLVTLDH------RIAALTGLDIQPPYAEYLQVVNYGIGGHYEP 446

  Fly   359 HLD-CEQPKEFIGYYPKEYRSASAMFYLSDVQMGGYASFPDLGFGFKPRRGSALVWHNTDNSGNC 422
            |.| ...|...:.......|.|:.|.|||.|:.||..:|....|.....:.:||.|.|...||..
Mouse   447 HFDHATSPSSPLYRMKSGNRVATFMIYLSSVEAGGATAFIYGNFSVPVVKNAALFWWNLHRSGEG 511

  Fly   423 DTRSLQATCPVLLGNQWVAKKWISGSGQWRRKSC 456
            |..:|.|.||||:|::|||.|||...||..|:.|
Mouse   512 DGDTLHAGCPVLVGDKWVANKWIHEYGQEFRRPC 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11828NP_651648.5 P4Ha_N 1..126 CDD:285528 35/132 (27%)
P4Hc 287..445 CDD:214780 55/176 (31%)
P4ha3XP_006508007.1 P4Ha_N 31..157 CDD:369820 35/129 (27%)
P4Hc 363..535 CDD:214780 56/177 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839351
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.740

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