DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11828 and phy-4

DIOPT Version :10

Sequence 1:NP_651648.5 Gene:CG11828 / 43416 FlyBaseID:FBgn0039616 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_001123049.1 Gene:phy-4 / 189869 WormBaseID:WBGene00012815 Length:282 Species:Caenorhabditis elegans


Alignment Length:250 Identity:64/250 - (25%)
Similarity:100/250 - (40%) Gaps:41/250 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   219 TDLAKHLKDKLAHMFVHVDNCRGKNLLPSKSYLRCRYLRDGSPFLRMAPV---------KLEQLN 274
            ||......||:      .|.| ||.|....|       |||    |:...         |:|.|:
 Worm    22 TDETLEFNDKI------WDKC-GKELRGDSS-------RDG----RLVCYRLHKHLLIRKVEILS 68

  Fly   275 IEPFVGLFHDAISPAEQKDLLHLTDS-RLEHRK-------KDSSSVEAKVDT----NASDHVRRI 327
            .|||:..:|:.:.....|..:...:: |||..|       .:.|.|.|...|    .......||
 Worm    69 SEPFILQYHNQVHRRLAKRAVQEAEALRLEQLKISGFTTTPEKSQVRAANGTWLIHTGRPSFARI 133

  Fly   328 HQRIE-DITGFDLEESEPLTVSNYGIGGQDFIHLDCEQPKEFIGYYP-KEYRSASAMFYLSDVQM 390
            .:.:: :|...||..:||..:.:|...|....|.|...|...:.... :..|.|:.:..|...:.
 Worm   134 FEGLQANINSLDLSTAEPWQILSYNADGYYAPHYDYLNPATNVQLVEGRGNRIATVLVILQIAKK 198

  Fly   391 GGYASFPDLGFGFKPRRGSALVWHNTDNSGNCDTRSLQATCPVLLGNQWVAKKWI 445
            ||...||.|....:|:.|..:||.||.::|..::::|.|.||:..|.:..|..|:
 Worm   199 GGTTVFPRLNLNIRPKAGDVIVWLNTLSTGESNSQTLHAACPIHEGTKIGATLWV 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11828NP_651648.5 P4Ha_N 1..128 CDD:462433
P4Hc 287..445 CDD:214780 42/171 (25%)
phy-4NP_001123049.1 P4Hc 81..254 CDD:214780 43/172 (25%)
Blue background indicates that the domain is not in the aligned region.

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