DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11828 and phy-3

DIOPT Version :9

Sequence 1:NP_651648.5 Gene:CG11828 / 43416 FlyBaseID:FBgn0039616 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_507251.2 Gene:phy-3 / 188624 WormBaseID:WBGene00004026 Length:318 Species:Caenorhabditis elegans


Alignment Length:289 Identity:60/289 - (20%)
Similarity:103/289 - (35%) Gaps:68/289 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 LLAMHDLPASQAAFRDSIGWASK-----EDNTDLAKHLK-DKLAHMFVHVDNCRGKNLLPSKSYL 251
            |||..|.......|.....|::.     :|.|...|..| |.:...:|:                
 Worm    30 LLAQDDFNEQFTNFLGEKWWSTDQLELCDDETKDTKWQKNDSICITYVY---------------- 78

  Fly   252 RCRYLRDGSPFLRMAPVKLEQLNIEPFVGLFHDAISPAEQKDLLHLTDSR-LE------------ 303
                        .|.||.:|.::..|.:.::.:.:||.:....|:..:.| ||            
 Worm    79 ------------NMLPVDMEIISWAPTLVIYRNLMSPRQTASFLNFIEQRDLEIQKTSDFGTSIE 131

  Fly   304 --HRKKDSSSVEAKVDTNASDHVRRIHQRIEDITGFDLEESEPLTVSNYGIGGQDFIHLDCEQPK 366
              ||:.:.|.:..: |:|.:..::.  |..:.|.|.:|..:|..:..:|..||...:|.|     
 Worm   132 TTHRRANGSFIPPE-DSNVTVEIKM--QAQKRIPGLNLTVAEHFSALSYLPGGHYAVHYD----- 188

  Fly   367 EFIGYYPKE----------YRSASAMFYLSDVQMGGYASFPDLGFGFKPRRGSALVWHNTDNSGN 421
             ::.|..|:          .|..:.:|.|...:.||...||.:|...:...|.|..|.|......
 Worm   189 -YLDYRSKQDYDWWMNKTGNRIGTLIFVLKPAEKGGGTVFPSIGSTVRANAGDAFFWFNAQADEE 252

  Fly   422 CDTRSLQATCPVLLGNQWVAKKWISGSGQ 450
            .:..|....||:..|.:.:|..||....|
 Worm   253 KEMLSNHGGCPIYEGRKVIATIWIRAYNQ 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11828NP_651648.5 P4Ha_N 1..126 CDD:285528
P4Hc 287..445 CDD:214780 40/182 (22%)
phy-3NP_507251.2 P4Hc 102..277 CDD:214780 41/183 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.770

Return to query results.
Submit another query.