DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11828 and phy-2

DIOPT Version :9

Sequence 1:NP_651648.5 Gene:CG11828 / 43416 FlyBaseID:FBgn0039616 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_502317.1 Gene:phy-2 / 178170 WormBaseID:WBGene00004025 Length:539 Species:Caenorhabditis elegans


Alignment Length:500 Identity:137/500 - (27%)
Similarity:224/500 - (44%) Gaps:56/500 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLQIEDELIGYMRQYAMELQHKVNTMRTFQEEWMTRRALGPADPTSYVANPLISFPLMRRTYTDV 68
            :|..|.::...:.||....:.:::.:|.:..|::.|.|...:....:|.||:.::.|::|..|:.
 Worm    28 MLGAEKDVTTIIDQYIEAERARLDDLRRYAHEYVHRNAHAESVGPEFVTNPINAYLLIKRLTTEW 92

  Fly    69 PKLLELAREEFKPGPFQKFIDYDLSSISDV------ELETAVTGMLRFQGVYGMDESEMANGKLH 127
            .|:..:.... |...|.|.|. |....|:|      :|..|.|.:||.|..|.:|..:::||.:.
 Worm    93 KKVENIMLNN-KASTFLKNIT-DNRVRSEVKFPGEEDLSGAATALLRLQDTYSLDTLDLSNGIIG 155

  Fly   128 GKQYNSRMSAADCLAVATHLENVDKGKLAC-KWFKVAIDQYEEKLDP-----------VNRLLQT 180
            |::.::::|..|...|.....| .|....| .|.:||:.:.|.:..|           ...|.|.
 Worm   156 GEKVSNKLSGHDTFEVGRSAYN-QKDYYHCLMWMQVALVKIENENPPTIEEWEILEYLAYSLYQQ 219

  Fly   181 GRSQIYEKLGLTLLAMHDLPASQAAFRDSIGW-----ASKEDNTDLA----KHLK-DKLAHMFVH 235
            |  .:...|.||.......|....| :.::.|     ..|:...||.    |.:: |.:.....:
 Worm   220 G--NVRRALSLTKRLAKIAPNHPRA-KGNVKWYEDMLQGKDMVGDLPPIVNKRVEYDGIVERDAY 281

  Fly   236 VDNCRGKNLLPS-----KSYLRCRYLRDGSPFLRMAPVKLEQLNIEPFVGLFHDAISPAEQKDLL 295
            ...|||:  :|.     |:.||| ||:...|||::||:|:|.|..:|...||.:.|..:|.:.:.
 Worm   282 EALCRGE--IPPVEPKWKNKLRC-YLKRDKPFLKLAPIKVEILRFDPLAVLFKNVIHDSEIEVIK 343

  Fly   296 HLTDSRLEHRKKDSS------------SVEAKVDTNASDHVRRIHQRIEDITGFDLEESEPLTVS 348
            .|...:|:.....:|            |..|.:..:....:.|:::||||.|..:...||.|.|:
 Worm   344 ELASPKLKRATVQNSKTGELEHATYRISKSAWLKGDLDPVIDRVNRRIEDFTNLNQATSEELQVA 408

  Fly   349 NYGIGGQDFIHLDCEQPKEFIGYYPKE--YRSASAMFYLSDVQMGGYASFPDLGFGFKPRRGSAL 411
            |||:||....|.|..:.:|...:....  .|.|:.:||:|..:.||...|..||....|.:..||
 Worm   409 NYGLGGHYDPHFDFARKEEKNAFKTLNTGNRIATVLFYMSQPERGGATVFNHLGTAVFPSKNDAL 473

  Fly   412 VWHNTDNSGNCDTRSLQATCPVLLGNQWVAKKWISGSGQWRRKSC 456
            .|:|....|..|.|:..|.||||||.:||:.|||...||...:.|
 Worm   474 FWYNLRRDGEGDLRTRHAACPVLLGVKWVSNKWIHEKGQEFTRPC 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11828NP_651648.5 P4Ha_N 1..126 CDD:285528 32/127 (25%)
P4Hc 287..445 CDD:214780 52/171 (30%)
phy-2NP_502317.1 P4Ha_N 21..154 CDD:285528 32/127 (25%)
TPR_16 169..240 CDD:290168 16/73 (22%)
P4Hc 335..508 CDD:214780 53/172 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.920

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