DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11828 and p4ha1

DIOPT Version :9

Sequence 1:NP_651648.5 Gene:CG11828 / 43416 FlyBaseID:FBgn0039616 Length:458 Species:Drosophila melanogaster
Sequence 2:XP_031761963.1 Gene:p4ha1 / 100490484 XenbaseID:XB-GENE-987760 Length:526 Species:Xenopus tropicalis


Alignment Length:520 Identity:146/520 - (28%)
Similarity:231/520 - (44%) Gaps:90/520 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASLLQIEDELIGYMRQYAMELQHKVNTMRTFQEEWMTRRALGPADPTSYVANPLISFPLMRRTY 65
            |..||..|.:|:..::.|....:.|:..::.:.::..........||..|:.:|:.:|.||:|..
 Frog    27 MIDLLNTEKDLVTSLKDYIKAEEQKLAQIKKWADKLDHLTDTATKDPEGYLGHPVNAFKLMKRLN 91

  Fly    66 TDVPKLLELAREEFKPGPFQKFIDYDLSSI--------SDVELETAVTGMLRFQGVYGMDESEMA 122
            |:..||..|..::...|    ||    |::        :|.:...|...:||.|..|.:|...::
 Frog    92 TEWVKLENLILKDISDG----FI----SNLTIQRQYFPNDEDQTGAAKALLRLQDTYNLDTDTIS 148

  Fly   123 NGKLHGKQYNSRMSAADCLAVATHLENVDKGKLACK---------WFKVAIDQY----EEKLDPV 174
            .|.|.|.::.:.::|.||.         |.||.|..         |.:.|:.|.    |..||.|
 Frog   149 KGNLPGVKHKTSLTAEDCF---------DLGKTAYTDADYYHTELWMEQALSQLDAGEESSLDKV 204

  Fly   175 NRLLQTGRSQIYEK------LGLTLLAMHDLPASQAAFRDSIGWASKEDNTDLAK-----HLKDK 228
             .:|......:|::      |.||..::...|..|....:.....|||.|...:.     .|:.:
 Frog   205 -MVLDYLSYAVYQQGDLDKALTLTKRSLELDPEHQRGNGNLRHIMSKESNKSSSSPSEGAELRTR 268

  Fly   229 LAHMFVHVDN------CRGKNL-LPSKSYLR--CRYLRDG--SPFLRMAPVKLEQLNIEPFVGLF 282
            ......|::.      |||:.: :.|:...|  |||. ||  .|.|.::|.|.|....:|.:..:
 Frog   269 KGRPKDHLEKEKYEKLCRGEGVKMTSRRQKRLFCRYF-DGKKDPLLILSPTKQEDEWDKPRIVRY 332

  Fly   283 HDAISPAEQKDLLHLTDSRLEHRKKDSSSVEAKVDT-------------NASDHVRRIHQRIEDI 334
            ||.||..|...:..|...|| .|...|:.:...::|             .....|.|:::|||.:
 Frog   333 HDIISDEEISKVKELAKPRL-RRATISNPITGVLETAQYRITKSAWLSGYEDPVVARLNRRIEGV 396

  Fly   335 TGFDLEESEPLTVSNYGIGGQDFIHLDCEQPKEFI-GYYPKEY-------RSASAMFYLSDVQMG 391
            ||.|:..:|.|.|:|||||||...|.|      |: .|.|..:       |.|:.:||:|||:.|
 Frog   397 TGLDMSTAEELQVANYGIGGQYEPHFD------FLRKYEPDAFKKLGTGNRVATWLFYMSDVEAG 455

  Fly   392 GYASFPDLGFGFKPRRGSALVWHNTDNSGNCDTRSLQATCPVLLGNQWVAKKWISGSGQWRRKSC 456
            |...||::|....|::|:|:.|:|...||..|..:..|.||||:||:||:.|||...||..|:.|
 Frog   456 GATVFPEVGAAVYPKKGTAVFWYNLLESGEGDYSTRHAACPVLVGNKWVSNKWIHERGQEFRRPC 520

  Fly   457  456
             Frog   521  520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11828NP_651648.5 P4Ha_N 1..126 CDD:285528 31/132 (23%)
P4Hc 287..445 CDD:214780 61/178 (34%)
p4ha1XP_031761963.1 P4Ha_N 24..111 CDD:400573 22/91 (24%)
P4Hc 337..510 CDD:214780 62/179 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.110

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