DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11828 and p4htm

DIOPT Version :10

Sequence 1:NP_651648.5 Gene:CG11828 / 43416 FlyBaseID:FBgn0039616 Length:458 Species:Drosophila melanogaster
Sequence 2:XP_002933103.2 Gene:p4htm / 100486123 XenbaseID:XB-GENE-950282 Length:505 Species:Xenopus tropicalis


Alignment Length:321 Identity:81/321 - (25%)
Similarity:122/321 - (38%) Gaps:80/321 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 KLGLTLLAMHDLPASQAAFRDSIGWASKEDNTDLAK--------HLKD---KLAHMFVHVDNCRG 241
            ||.:.|..:..|..||....|  |:....||.|::|        |.:|   ::..:..|.....|
 Frog   161 KLLIHLARLKGLQTSQILPVD--GYKEAMDNLDISKADIFNLLDHNQDGQLQIKEVLTHSRLGNG 223

  Fly   242 KNLLPS---KSYLRCRYLRDGSPFLRMAPVKLEQLNIEPFVGLFHDAISPAEQKDLLHLTDSRLE 303
            :.:.|.   :.|...|...||:..|.:...|  :||:..    ||..:...|      :|.|.|.
 Frog   224 RWMTPENIREMYSALRADPDGNGVLSLDEFK--KLNLRD----FHKYLGKQE------VTMSDLV 276

  Fly   304 HRKKDSSSVEAKVDTNASDHV-RRIHQRIEDITGFDL---EESEPLTVSNYGIGGQDFIHLD--- 361
            .....:...:.:    .:.|| |.|.||:..:|...|   |.||||.|..|..||....|:|   
 Frog   277 RNSHHTWLYQGE----GAHHVLRSIRQRVIKLTHLPLDIVENSEPLQVVRYDTGGHYHAHMDSGP 337

  Fly   362 ------CEQPK---EFIGYYPKEYRSASAMFYLSDVQMGGYASFP-----------------DL- 399
                  |...|   .....:....|..:.:|||::|..||..:||                 || 
 Frog   338 VFPETACTHTKLTTNETAPFETSCRYVTVLFYLNNVTGGGETTFPVADNRTYEELSLIQNDVDLR 402

  Fly   400 ---------GFGFKPRRGSALVWHN--TDNS---GNCDTRSLQATCPVLLGNQWVAKKWIS 446
                     ....|||:|:|:.|:|  :|..   |:.|..:|...|.|..|.:|:|..||:
 Frog   403 DTRKHCDKGNLRIKPRQGTAVFWYNYLSDGKGWVGDVDEFALHGGCLVTAGTKWIANNWIN 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11828NP_651648.5 P4Ha_N 1..128 CDD:462433
P4Hc 287..445 CDD:214780 52/205 (25%)
p4htmXP_002933103.2 FRQ1 <195..262 CDD:444056 13/72 (18%)
P4Hc 273..462 CDD:214780 50/192 (26%)
Blue background indicates that the domain is not in the aligned region.

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