DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doa and clk3

DIOPT Version :9

Sequence 1:NP_001014681.2 Gene:Doa / 43415 FlyBaseID:FBgn0265998 Length:2045 Species:Drosophila melanogaster
Sequence 2:NP_001011462.1 Gene:clk3 / 496952 XenbaseID:XB-GENE-5861130 Length:498 Species:Xenopus tropicalis


Alignment Length:416 Identity:219/416 - (52%)
Similarity:288/416 - (69%) Gaps:22/416 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly  1606 SPASSSSNKQPQQPQQQQQQQQSQLQQSNSVIFNH---SGQQHQPHQQQQNEMSKSALGLHFIET 1667
            |.:.|.|.:.|.:|..:.:.:....:|.:.:...|   ||.......|:..:.|::         
 Frog    86 SKSYSYSTRSPARPHSRDRTKTKAEKQPHKISHKHSTRSGSYSSSKSQRSTKDSQN--------- 141

  Fly  1668 AKPVIQDDADGHLIYHTGDILHHRYKIMATLGEGTFGRVVKVKDMER-DYCMALKIIKNVEKYRE 1731
                :::|.:|||:..||:.:..||:|:..||:||||:||:..|:.| :..:|||||:||.||||
 Frog   142 ----VENDKEGHLVCRTGERIQERYEIVGDLGKGTFGKVVECLDLARGNSRVALKIIRNVRKYRE 202

  Fly  1732 AAKLEINALEKIAQKDPHCDHLCVKMIDWFDYHGHMCIVFEMLGLSVFDFLRENNYEPYPLDQVR 1796
            ||:||||.||||.::|....::||.|.||||:|||:||.||:||.|.|:|.:|||:.||||..:|
 Frog   203 AAQLEINVLEKIKERDQDNKNMCVLMRDWFDFHGHVCIAFELLGKSTFEFQKENNFLPYPLAHIR 267

  Fly  1797 HMAYQLCYSVKFLHDNRLTHTDLKPENILFVDSDYTSHYNHKINREVRRVKNTDVRLIDFGSATF 1861
            |||:|||.::||||:|:||||||||||||||:|:|...||.....|.:.|||..:|::|||||||
 Frog   268 HMAFQLCQALKFLHENQLTHTDLKPENILFVNSEYDICYNESKKCEEKCVKNPSIRIVDFGSATF 332

  Fly  1862 DHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCILFELYLGITLFQTHDNREHLAMMERILG 1926
            |||:|:|||:|||||.|||||||||||||||||:||||||.|.|.||||||||||||.|||:|||
 Frog   333 DHEYHTTIVATRHYRPPEVILELGWSQPCDVWSLGCILFEYYTGFTLFQTHDNREHLVMMEKILG 397

  Fly  1927 QIPYRMARNHTLYSKTKTKYFYHGKLDWDEKSSAGRYVRDHCKPLFLCQLSDSEDHCELFSLIKK 1991
            .:|.||     :|...|.|||::|.|.|||.||.||||..:|..|...:.|||.:|.:||.|:.:
 Frog   398 PLPRRM-----VYKTRKQKYFHNGSLIWDENSSDGRYVSKNCHQLMSYKSSDSAEHVQLFDLLSR 457

  Fly  1992 MLEYEPSSRITLGEALHHPFFDRLPP 2017
            |||:.|:.||||.|||.|.||..|.|
 Frog   458 MLEFRPALRITLQEALEHQFFTCLKP 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DoaNP_001014681.2 PKc_CLK 1679..2012 CDD:271036 202/333 (61%)
S_TKc 1692..2012 CDD:214567 197/320 (62%)
clk3NP_001011462.1 PKc_like 148..478 CDD:389743 203/334 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000672
OrthoInspector 1 1.000 - - otm47924
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X440
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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