DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doa and clk2

DIOPT Version :10

Sequence 1:NP_001014681.2 Gene:Doa / 43415 FlyBaseID:FBgn0265998 Length:2045 Species:Drosophila melanogaster
Sequence 2:XP_031746276.1 Gene:clk2 / 496828 XenbaseID:XB-GENE-922501 Length:503 Species:Xenopus tropicalis


Alignment Length:544 Identity:272/544 - (50%)
Similarity:355/544 - (65%) Gaps:74/544 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly  1482 LTHSASFSSAQRPTALQFHQQHQQQQHLQQQQQ-------HPQQQQHQHSSFGVGMMSRNYYNMP 1539
            :.||..:.|::|.:...:|::::.::|.:::.:       ..:.::|:|.. .....||:|....
 Frog     1 MPHSRRYRSSERGSRGSYHERYRSRKHRRRRSRSRSSSSDRGRDRRHKHGD-SYHERSRSYEERS 64

  Fly  1540 KQPERKPLQTFDPYAYPKPNQMQ----PVKYQQQQQHPHTQFQNASAGGGGGGAAGLQYDPNTNT 1600
            ........:..|.|   :.|:..    .|.|:...:|.:                  :|.     
 Frog    65 SNRRAYDRRYCDGY---RRNEYSRDRGDVYYEADYRHSY------------------EYK----- 103

  Fly  1601 QLFYASPASSSSNKQPQQPQQQQQQQQSQLQQSNSVIFNHSGQQHQPHQQQQNEMSKSALGLHFI 1665
               ::...|..|.|..::.|::::::.....||:|            ..:|.:..:||       
 Frog   104 ---HSREDSYRSCKSARRKQKRRKRRTRSYSQSSS------------RSRQSSRRAKS------- 146

  Fly  1666 ETAKPVIQDDADGHLIYHTGDILHHRYKIMATLGEGTFGRVVKVKDMERDYC-MALKIIKNVEKY 1729
                  ::||.:||||||:||.|..||:|::|||||||||||:..|..|... :|||||||||||
 Frog   147 ------VEDDVEGHLIYHSGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKY 205

  Fly  1730 REAAKLEINALEKIAQKDPHCDHLCVKMIDWFDYHGHMCIVFEMLGLSVFDFLRENNYEPYPLDQ 1794
            :|||:||||.||||.:|||...||||:|.|||||||||||.||:||||.||||:||||.|||:.|
 Frog   206 KEAARLEINVLEKINEKDPENKHLCVQMYDWFDYHGHMCISFELLGLSTFDFLKENNYFPYPIHQ 270

  Fly  1795 VRHMAYQLCYSVKFLHDNRLTHTDLKPENILFVDSDYTSHYNHKINREVRRVKNTDVRLIDFGSA 1859
            |||||.|:|.:|||||||:||||||||||||||.|||...||.:..|:.|.|||||:|::|||||
 Frog   271 VRHMALQVCQAVKFLHDNKLTHTDLKPENILFVSSDYELTYNMEKKRDERCVKNTDIRVVDFGSA 335

  Fly  1860 TFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCILFELYLGITLFQTHDNREHLAMMERI 1924
            |||||||||||||||||||||||||||:|||||||:|||:||.|:|.||||||||||||||||||
 Frog   336 TFDHEHHSTIVSTRHYRAPEVILELGWNQPCDVWSVGCIIFEYYVGFTLFQTHDNREHLAMMERI 400

  Fly  1925 LGQIPYRMARNHTLYSKT-KTKYFYHGKLDWDEKSSAGRYVRDHCKPLFLCQLSDSEDHCELFSL 1988
            ||.:|.||.|      || |.||||||:||||:.:|||||||::||||....:.::|:|.:||||
 Frog   401 LGPVPSRMVR------KTRKQKYFYHGRLDWDDNTSAGRYVRENCKPLRRYMMMETEEHHQLFSL 459

  Fly  1989 IKKMLEYEPSSRITLGEALHHPFF 2012
            |:.|||||||.|:||..||.||||
 Frog   460 IEGMLEYEPSKRMTLAAALKHPFF 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DoaNP_001014681.2 PHA03247 <205..634 CDD:223021
PKc_CLK 1679..2012 CDD:271036 239/334 (72%)
clk2XP_031746276.1 PKc_CLK2 154..483 CDD:271117 239/334 (72%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.