DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doa and prpf4ba

DIOPT Version :9

Sequence 1:NP_001014681.2 Gene:Doa / 43415 FlyBaseID:FBgn0265998 Length:2045 Species:Drosophila melanogaster
Sequence 2:XP_017207374.1 Gene:prpf4ba / 393182 ZFINID:ZDB-GENE-040426-947 Length:986 Species:Danio rerio


Alignment Length:1093 Identity:218/1093 - (19%)
Similarity:408/1093 - (37%) Gaps:297/1093 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1086 LKSSSS----SCVP----SPRCAAAFFRRPQEANNPQQQHHQPLQKPQQVAPIEESGPGDSASLE 1142
            ::||.|    .|||    :.:.....|.|.::....:.:|....:|.:..:|       |....:
Zfish    19 MESSDSVDENECVPGEDGAKKADNMDFARVEKHKKRKHKHRSKHKKHKHSSP-------DERDQK 76

  Fly  1143 RKSEKSNSTLSTSSFTVTNCCTTHLPQLSKFTSSFHIAPTTATTTAATATPTPTGAATTSDQQQQ 1207
            .|.:..:......||.....|:|.....:.....|.:                ...|...|.::|
Zfish    77 HKYKHKHKRKHRDSFRDDRECSTSYEGAADSPKRFRL----------------DDLAALEDLEKQ 125

  Fly  1208 SGGTPAMVAANLE---------------VPTSSSSSAATKRQKDVDN--KLEKCLNDMLKLKTSS 1255
            .    ||:.|.|:               :...:|.|...:.|:.|.|  :..|.|::::.:|.:.
Zfish   126 R----AMIQAELDNELMEGSVQSGMGLILQGYNSDSEDGEVQEAVRNGEQQRKDLDELVTVKGNG 186

  Fly  1256 NNNSTSNSNNNAIMSHSLTGEHKDPKTALEGPTSS-----SSSSSSKYIGESQIPVPVQLYDPQK 1315
            ........|:....|            .|||.|.|     .|..|.|  .||...:.:::  .::
Zfish   187 RKLQQDYVNDEQFYS------------VLEGRTMSEEVTVQSHKSEK--RESMTGLGIKI--SER 235

  Fly  1316 PLLQQQQQQQRICYPIGKSNSTSQLPMGGYQRLLQHQQQQHHQQQQQQHQEQQQYPQHKRPFLNW 1380
            |....:.:::|      :|.||              .:.:...::.:...:.::.|         
Zfish   236 PSGPSETKERR------RSRST--------------DRSKDRSRRSKSPVKSKEVP--------- 271

  Fly  1381 NSFACSAMNGASDPFMQQQHMPAHQQQQHLPHKLQQSYS-------SSHVPK--QAPKSGLAMFL 1436
            :|.|.|.....:.|           ::|.:.|:.....|       |:.:|:  :..|...|...
Zfish   272 SSSATSNRKSNTRP-----------EEQAVDHRSSSRSSKSGSKERSTSLPEVDRDKKPVKAPLK 325

  Fly  1437 QKNTNKENKFGQPMQQQPPGMMP---QMYGYQAPQQ----QSKIGYPRTGAPLTHSASFSSAQRP 1494
            :.::.|||:  .|.::|.|..:.   |...:::|::    |:.....|......|:.|.....|.
Zfish   326 EVSSGKENR--SPSRKQGPDRLSPTVQPRSHRSPERLPVVQNTDRASRQDRSTCHNRSPPRRGRS 388

  Fly  1495 TALQFHQQHQQQQHLQQQQQHPQQQQHQHSSFGVGMMSRNYYN------MPKQPERKPLQTFDPY 1553
            .:::..::.:::|.|...:...:.....|......:.||...|      ..:.|.|:..::  |.
Zfish   389 RSVERRRREEERQRLSSDRMRSRDMAGAHREDSPSISSRRRLNHSPLRRRSRSPRRRSSRS--PL 451

  Fly  1554 AYPKPNQM---QPV--KYQQQQQHPHTQFQNASAGGGGGGAAGLQ-------------------- 1593
            .:.:.::|   |||  :.|::::....:.::...|....|....|                    
Zfish   452 RHRERDRMDRRQPVRSRSQERRRRRSKEREDMFKGSLSEGMKAEQEDSDEEVLEDYDVDEEDEEA 516

  Fly  1594 ---------------YDP-NTNTQLF----YASPASSSSNKQPQQPQQQQQQQQSQL---QQSNS 1635
                           |.| |.::.:.    :.||.||:.::.| .|....::..:.:   :|.|.
Zfish   517 LIEQRRLQRLAIMQKYKPVNEDSNMSGLSDHGSPQSSTHSRSP-SPDDILERVAADVKAYEQENL 580

  Fly  1636 VIF--NHSGQQHQPHQQQQNEMSK--------------------------SALGLHFIETAKPVI 1672
            ..|  |...:.....|::....||                          :.:|..|.|  .|.:
Zfish   581 DTFEDNVKAKYSLVSQEKNGANSKKPPAPDMFTESDDMFAAYFDSARLRAAGIGKDFKE--NPSL 643

  Fly  1673 QD---DADGHLIYHTGDILHHRYKIMATLGEGTFGRVVKVKDMER-DYCMALKIIKNVEKYREAA 1733
            :|   ||:|:...:.|::|..||.:....|:|.|..|::.:|:.| :..:|:|||:|.|..::..
Zfish   644 RDNWTDAEGYYRVNIGEVLDKRYAVYGYTGQGVFSNVIRARDLARANQEVAVKIIRNNEMMQKTG 708

  Fly  1734 KLEINALEKIAQKDPHCDHLCVKMIDWFDYHGHMCIVFEMLGLSVFDFLRENNYEPYPLD----- 1793
            ..|:..|:|:...|......|:::...|.:..|:|:|||.|.:::.:.||:     |..|     
Zfish   709 LKELEFLKKLNDADADDKFHCLRLFRHFYHKQHLCLVFEPLSMNLREVLRK-----YGKDVGLHI 768

  Fly  1794 -QVRHMAYQLCYSVKFLHDNRLTHTDLKPENILFVDSDYTSHYNHKINREVRRVKNTDVRLIDFG 1857
             .||..:.||..::|.|....:.|.|:||:|||             :|.     ..|.::|.|||
Zfish   769 KAVRSYSQQLFLALKHLKRCNILHADIKPDNIL-------------VNE-----PKTILKLCDFG 815

  Fly  1858 SATF--DHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCILFELYLGITLFQTHDNREHLAM 1920
            ||:.  |::....:|| |.|||||:|:...:....|:||:||.|:|||.|..||....|...|.:
Zfish   816 SASHVADNDITPYLVS-RFYRAPEIIIGKSYDYGIDMWSVGCTLYELYTGKILFPGKTNNHMLKL 879

  Fly  1921 MERILGQIPYRMARN------------HTLYSKTKTKYFYHGKLDWDEK---------------S 1958
            ...:.|::|.:|.|.            :.||::.       .|:...||               .
Zfish   880 NMDLKGKLPNKMIRKGLFKDQHFDQNLNFLYTEV-------DKVTEREKITVMSTINPTKDLSMD 937

  Fly  1959 SAGRYVRDHCKPLFLCQLSDSEDHCELFSLIKKMLEYEPSSRITLGEALHHPF 2011
            ..||......:...:.||.|         |:.::|..:|:.|||:.:||.|||
Zfish   938 MVGRQALPEDQRKKVGQLKD---------LLDQILMLDPAKRITINQALQHPF 981

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DoaNP_001014681.2 PKc_CLK 1679..2012 CDD:271036 102/369 (28%)
S_TKc 1692..2012 CDD:214567 99/356 (28%)
prpf4baXP_017207374.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0667
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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