DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doa and Dyrk4

DIOPT Version :9

Sequence 1:NP_001014681.2 Gene:Doa / 43415 FlyBaseID:FBgn0265998 Length:2045 Species:Drosophila melanogaster
Sequence 2:XP_038964750.1 Gene:Dyrk4 / 312721 RGDID:1306800 Length:649 Species:Rattus norvegicus


Alignment Length:665 Identity:154/665 - (23%)
Similarity:282/665 - (42%) Gaps:155/665 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  1410 LPHKLQQSYSSSHVPKQAP-----KSGLAMFLQKNTNKENKF-GQPMQQQPPGMMPQMYGY-QAP 1467
            |..:.:||::|...|...|     :|...:.|||.::|..|. .....|:.|......:.: ...
  Rat    32 LKARKKQSFTSVKGPTLPPDIYMVESKPLVQLQKPSSKTKKLRSNRCSQKNPSTSSSAFPFVDTK 96

  Fly  1468 QQQSKIGYPRTGAPL------------THSASFSSAQRPTALQF-HQQHQQQQHLQQQQQHPQQQ 1519
            .:::.:.:|..|...            .|:...||..:.:.:.| .....|...:|..:.||:  
  Rat    97 GKKNTVNFPHIGNKTLPKGSTLYQENQIHNQLLSSELKTSEIPFSFSTKAQDTKVQDTKLHPE-- 159

  Fly  1520 QHQHSSFGVGMMSRNYYNMPKQPERKPLQTFDPYAYPKPNQMQPVKYQQQQQHPHTQFQNASAGG 1584
                              :||: .:.||...:...:.| ||:.|  |:|.:.             
  Rat   160 ------------------LPKR-HKVPLTAAEALKFFK-NQLSP--YEQSEI------------- 189

  Fly  1585 GGGGAAGLQYDPNTNTQLFYASPASSSSNKQPQQPQQQQQQQQSQLQQSNSVIFNHSGQQHQPHQ 1649
                   |.|     ::|::....:...|..|:                                
  Rat   190 -------LGY-----SELWFLGLDAKKLNVVPE-------------------------------- 210

  Fly  1650 QQQNEMSKSALGLHFIETAKPVIQDDADGHLIYHTGDILHHRYKIMATLGEGTFGRVVKVKDMER 1714
                :.||::.             ||..|..:....|.:.:||:::..:|:|:||:|.|..|.:.
  Rat   211 ----KFSKTSF-------------DDEHGSYVKVLHDHIAYRYEVLDMIGKGSFGQVAKCLDHKN 258

  Fly  1715 DYCMALKIIKNVEKYREAAKLEINALEKIAQKDPHCDHLCVKMIDWFDYHGHMCIVFEMLGLSVF 1779
            :..:|||||:|.:::...|.:|:..||.:.:||....|..|.|.|:|.:..|:||.||:||::::
  Rat   259 NELVALKIIRNKKRFHHQALVELKILEALRRKDKDNTHNVVHMKDFFYFRNHLCITFELLGINLY 323

  Fly  1780 DFLRENNYEPYPLDQVRHMAYQLCYSVKFLHDNRLTHTDLKPENILFVDSDYTSHYNHKINREVR 1844
            :.::.|:::.:.|..||.....:...::.|:..::.|.|||||||:..         |:      
  Rat   324 ELMKNNSFQGFSLSIVRRFTLSVLKCLQMLYVEKIIHCDLKPENIVLY---------HR------ 373

  Fly  1845 RVKNTDVRLIDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCILFELYLGITLF 1909
              ....|::|||||:.::|:...|.:.:|.||:|||||...::...|:||:|||:.|||.|..||
  Rat   374 --GQVTVKVIDFGSSCYEHQKVYTYIQSRFYRSPEVILGHPYNMAIDMWSLGCIMAELYTGYPLF 436

  Fly  1910 QTHDNREHLAMMERILGQIPYRMARNHTLYSKTKTKYFYHGK-LDWDEKSSAG--RYVRDHCKPL 1971
            ...:..|.||.:..:||..|     .|.:.:.|:.:.|:..| |..:..::.|  ||......|:
  Rat   437 PGENEVEQLACIMEVLGLPP-----THLIQTATRRQIFFDSKGLPKNITNNRGEKRYPNSKDLPM 496

  Fly  1972 FLCQLSDSEDHCELFSLIKKMLEYEPSSRITLGEALHHPFFD---RLPPHHRVGEVSNKQPLSSG 2033
            .:.....|     ....:::.|.:|||.|:|..:||.|.:..   :..|..| .::..|..:||.
  Rat   497 VVKTYDSS-----FLDFLRRCLVWEPSLRMTPDQALKHAWIHEPRKFKPWPR-PQIQRKPGVSSS 555

  Fly  2034 S-SSRERS--HSLSR 2045
            | :|::::  |..|:
  Rat   556 SETSKDKTEEHQASK 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DoaNP_001014681.2 PKc_CLK 1679..2012 CDD:271036 101/335 (30%)
S_TKc 1692..2012 CDD:214567 99/322 (31%)
Dyrk4XP_038964750.1 PKc_DYRK4 192..532 CDD:271127 110/420 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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