DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doa and prp4

DIOPT Version :9

Sequence 1:NP_001014681.2 Gene:Doa / 43415 FlyBaseID:FBgn0265998 Length:2045 Species:Drosophila melanogaster
Sequence 2:NP_588261.1 Gene:prp4 / 2539312 PomBaseID:SPCC777.14 Length:477 Species:Schizosaccharomyces pombe


Alignment Length:532 Identity:137/532 - (25%)
Similarity:230/532 - (43%) Gaps:91/532 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly  1502 QHQQQQHLQQQQQHPQQQQHQHSSFGVGMMSRNYYNMPKQPERKPLQTFDPYAYPKPNQMQPVKY 1566
            |.::::.|:..::: ||..:.||...:             ||:|..:..|..:..||.:..|   
pombe    13 QQRRKRRLEILKKY-QQTGNGHSDLSI-------------PEKKLKEDVDQVSTTKPIEAVP--- 60

  Fly  1567 QQQQQHPHTQFQNASAGGGGGGAAGLQYDPNTNTQLFYASPASSSSNKQPQQPQQQQQQQQSQLQ 1631
              :.:...::.:....|.            |:||:|...:..:|.|         ...:...|::
pombe    61 --KMKTNASKIEINKEGS------------NSNTKLDVTNSTTSDS---------PSIKSSVQIE 102

  Fly  1632 QSNSVIFNHSGQQHQPHQQQQNEMSKSALGLHFIETAKPVIQ---DDADGHLIYHTGDILHHRYK 1693
            .:...:|..|   ..|..::||    :..|:..:..:...:|   ||.:|:......:.|..||.
pombe   103 DTEDDMFADS---PSPSVKRQN----TGKGISTLTRSFADMQDNWDDIEGYYKVVLMEELDSRYI 160

  Fly  1694 IMATLGEGTFGRVVKVKDMERDYCMALKIIKNVE-KYREAAKLEINALEKIAQKDPHCDHLCVKM 1757
            :.:.||:|.|..||...|..|:...|:|||:|.| .|:|..| |::.||::...|.......:..
pombe   161 VQSNLGKGMFSTVVSALDRNRNQTFAIKIIRNNEVMYKEGLK-EVSILERLQAADREGKQHIIHY 224

  Fly  1758 IDWFDYHGHMCIVFEMLGLSVFDFLRE-NNYEPYPLDQVRHMAYQLCYSVKFLHDNRLTHTDLKP 1821
            ...|.:..|:|:|||||.|::.|.|:: .......:..||..|||:..::..|....:.|:|:||
pombe   225 ERHFMHKNHLCMVFEMLSLNLRDILKKFGRNVGLSIKAVRLYAYQMFMALDLLKQCNVIHSDIKP 289

  Fly  1822 ENILFVDSDYTSHYNHKINREVRRVKNTDVRLIDFGSATFDHEHHST--IVSTRHYRAPEVILEL 1884
            :|:|             :|.     |...:::.|.|||:...|:..|  :|| |.|||||:||..
pombe   290 DNML-------------VNE-----KRNILKICDLGSASDASENEITPYLVS-RFYRAPEIILGF 335

  Fly  1885 GWSQPCDVWSIGCILFELYLGITLFQTHDNREHLAMMERILGQIPYRMARNHTLYSKTKTKYFYH 1949
            .:|.|.|.||:||.|:|||.|..||....|.:.|..|....|:..::|.:.....:......|..
pombe   336 PYSCPIDTWSVGCSLYELYTGQILFPGRTNNQMLRYMMECKGKFSHKMLKRSQFLNDHFDADFNF 400

  Fly  1950 GKLDWD-----------EKSSAGRYVRDHCKPLFLCQLSDSEDHC---ELFSLIKKMLEYEPSSR 2000
            .::|.|           :.|...:.:|...|.:   ..|..|:..   ||..|::|.||..|..|
pombe   401 IQIDHDPITNQETRKPVKFSKPTKDIRSRLKEV---PTSTDEEFIIRQELMDLLEKCLELNPEKR 462

  Fly  2001 ITLGEALHHPFF 2012
            :....||.||||
pombe   463 VPPEVALKHPFF 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DoaNP_001014681.2 PKc_CLK 1679..2012 CDD:271036 104/350 (30%)
S_TKc 1692..2012 CDD:214567 102/337 (30%)
prp4NP_588261.1 STKc_PRP4 158..474 CDD:271037 103/338 (30%)
S_TKc 159..474 CDD:214567 102/337 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0667
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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