DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doa and hpk-1

DIOPT Version :9

Sequence 1:NP_001014681.2 Gene:Doa / 43415 FlyBaseID:FBgn0265998 Length:2045 Species:Drosophila melanogaster
Sequence 2:NP_741761.1 Gene:hpk-1 / 180695 WormBaseID:WBGene00001994 Length:846 Species:Caenorhabditis elegans


Alignment Length:456 Identity:123/456 - (26%)
Similarity:218/456 - (47%) Gaps:77/456 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly  1606 SPASSSSNKQPQQPQQQQQQQQSQLQQSN----SVIFNHSGQQHQPH-QQQQNEMSKSALGLHFI 1665
            :|.:||.|:| :.|:::..::.......|    |..|..:.....|. ....|:|:..::    .
 Worm    54 APGTSSDNEQ-RAPKRRADEEAVNAVPKNLLTTSSTFARAVIPAAPAISSANNKMAPQSV----T 113

  Fly  1666 ETAKPV-----IQDDADGHLIYHTGDIL----HHRYKIMATLGEGTFGRVVKVKDMERDYCMALK 1721
            .|||..     :..:.:..||  ..::|    .::|:::..||:||||:|||.........:|:|
 Worm   114 ATAKTTTNRGKVSGEGEYQLI--KNEVLCSPYGNQYEVLEFLGKGTFGQVVKAWKKGTSEIVAIK 176

  Fly  1722 IIKNVEKYREAAKLEINALEKIAQKDPHCDHLCVKMIDWFDYHGHMCIVFEMLGLSVFDFLRENN 1786
            |:|....|....::|::.|.:::.::.. :...|:..:.|::..|.|:|||||..:::|||::|.
 Worm   177 ILKKHPSYARQGQIEVSILSRLSNENSE-EFNFVRAFECFNHKSHTCLVFEMLEQNLYDFLKQNK 240

  Fly  1787 YEPYPLDQVRHMAYQLCYSVKFLHDNRLTHTDLKPENILFVDSDYTSHYNHKINREVRRVKNTDV 1851
            :.|.||:.:|.:.:|:..::..|....|.|.|||||||:.||.          .::..|||    
 Worm   241 FMPLPLNAIRPILFQVLTALLKLKSLGLIHADLKPENIMLVDP----------QQQPYRVK---- 291

  Fly  1852 RLIDFGSATFDHEHHS-----TIVSTRHYRAPEVILELGWSQPCDVWSIGCILFELYLGITLFQT 1911
             :||||||:    |.|     |.:.:|:|||||:||.|.:::..|:||:||::.||:||..|:..
 Worm   292 -VIDFGSAS----HRSKAVTNTYLQSRYYRAPEIILGLPFNESIDMWSLGCVIAELFLGWPLYPG 351

  Fly  1912 HDNREHLAMMERILGQIPYRM----ARNHTLYSKTKTK----------YFYHGKLDWDEKSSAGR 1962
            ....:.:..:.:..|..|..|    ::.|..:.:.|::          |:....::..|.||:..
 Worm   352 SSEYDQIRFIIQTQGLPPTSMLESASKLHRFFKEVKSESPNHTNVGGSYYRLKTVEEYEASSSTA 416

  Fly  1963 YVRDHCKPLF--------LC---------QLSDSEDHCELFSLIKKMLEYEPSSRITLGEALHHP 2010
            ..::..|.:|        :|         .|.|..|..|...::||||...|..|||..|.|...
 Worm   417 KSKETRKYIFNVIDDISRVCYGFESDPVEHLCDRIDRQEFVDVLKKMLVLNPDFRITPAEGLESK 481

  Fly  2011 F 2011
            |
 Worm   482 F 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DoaNP_001014681.2 PKc_CLK 1679..2012 CDD:271036 108/373 (29%)
S_TKc 1692..2012 CDD:214567 105/356 (29%)
hpk-1NP_741761.1 PKc_like 147..483 CDD:304357 105/356 (29%)
S_TKc 147..483 CDD:214567 105/356 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.