DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doa and Clk3

DIOPT Version :9

Sequence 1:NP_001014681.2 Gene:Doa / 43415 FlyBaseID:FBgn0265998 Length:2045 Species:Drosophila melanogaster
Sequence 2:XP_006243208.1 Gene:Clk3 / 171305 RGDID:621259 Length:640 Species:Rattus norvegicus


Alignment Length:636 Identity:255/636 - (40%)
Similarity:340/636 - (53%) Gaps:155/636 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  1391 ASDPFMQQQHMPAHQQQQHLPH-----KLQQSYSSSHVPKQAPKSGLAMFLQKNTNKENKFGQPM 1450
            |:..:....|...::..:..|:     |.::|||..|                    |.:...|.
  Rat   144 AAGAWETMHHCKRYRSPEPDPYLSYRWKRRRSYSREH--------------------EGRLRYPS 188

  Fly  1451 QQQPPGMMPQMYGYQAPQQQSKIGYPRTGAPLTHSASFSSAQRPTALQFHQQHQQQQHLQQQQQH 1515
            :::||                    ||.....:|       .|....:.:::|:.....:.:::.
  Rat   189 RREPP--------------------PRRSRSRSH-------DRIPYQRRYREHRDSDTYRCEERS 226

  Fly  1516 PQQQQHQHSSFGVGMMSRNYYNMPKQPERKPLQTFDPYAYPKPNQMQPVKYQQQQQHPHTQFQNA 1580
            |        |||     .:.|...:...|:..:...||              :.::|.|...:..
  Rat   227 P--------SFG-----EDCYGSSRSRHRRRSRERGPY--------------RTRKHAHHCHKRR 264

  Fly  1581 SAGGGGGGAAGLQYDPNTNTQLFYASPASSSSNKQPQQPQQQQQQQQSQLQQSNSVIFNHSGQQH 1645
            :..                     .|.|||.|             |||..:.|.||         
  Rat   265 TRS---------------------CSSASSRS-------------QQSSKRSSRSV--------- 286

  Fly  1646 QPHQQQQNEMSKSALGLHFIETAKPVIQDDADGHLIYHTGDILHHRYKIMATLGEGTFGRVVKVK 1710
                                       :||.:|||:...||.|..||:|:..|||||||:||:..
  Rat   287 ---------------------------EDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECL 324

  Fly  1711 DMERDYC-MALKIIKNVEKYREAAKLEINALEKIAQKDPHCDHLCVKMIDWFDYHGHMCIVFEML 1774
            |..|... :|||||:||.||||||:||||.|:||.:||.....|||.|.|||::||||||.||:|
  Rat   325 DHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL 389

  Fly  1775 GLSVFDFLRENNYEPYPLDQVRHMAYQLCYSVKFLHDNRLTHTDLKPENILFVDSDYTSHYNHKI 1839
            |.:.|:||:|||::||||..|||||||||::::|||:|:||||||||||||||:|::.:.||...
  Rat   390 GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHK 454

  Fly  1840 NREVRRVKNTDVRLIDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCILFELYL 1904
            :.|.:.||||.:|:.||||||||||||:|||:|||||.|||||||||:||||||||||||||.|.
  Rat   455 SCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 519

  Fly  1905 GITLFQTHDNREHLAMMERILGQIPYRMARNHTLYSKTKTKYFYHGKLDWDEKSSAGRYVRDHCK 1969
            |.||||||:|||||.|||:|||.||     :|.::...|.||||.|.|.|||.||.||||:::||
  Rat   520 GFTLFQTHENREHLVMMEKILGPIP-----SHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCK 579

  Fly  1970 PLFLCQLSDSEDHCELFSLIKKMLEYEPSSRITLGEALHHPFFDRLPPHHR 2020
            ||....|.||.:|.:||.|:::|||::|:.||||.|||.||||..|.|..|
  Rat   580 PLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPEER 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DoaNP_001014681.2 PKc_CLK 1679..2012 CDD:271036 209/333 (63%)
S_TKc 1692..2012 CDD:214567 203/320 (63%)
Clk3XP_006243208.1 PHA03247 29..>162 CDD:223021 2/17 (12%)
PKc_CLK3 292..622 CDD:271116 210/334 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 435 1.000 Domainoid score I554
eggNOG 1 0.900 - - E1_KOG0667
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000672
OrthoInspector 1 1.000 - - otm44882
orthoMCL 1 0.900 - - OOG6_100708
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X440
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.710

Return to query results.
Submit another query.