DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Doa and Clk3

DIOPT Version :9

Sequence 1:NP_001014681.2 Gene:Doa / 43415 FlyBaseID:FBgn0265998 Length:2045 Species:Drosophila melanogaster
Sequence 2:XP_036010394.1 Gene:Clk3 / 102414 MGIID:1098670 Length:507 Species:Mus musculus


Alignment Length:645 Identity:257/645 - (39%)
Similarity:344/645 - (53%) Gaps:163/645 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1390 GASDPFMQQQHM---PAHQQQQHL-----PH-----KLQQSYSSSHVPKQAPKSGLAMFLQKNTN 1441
            |.:.|.:|...:   |.|..:::.     |:     |.::|||..|                   
Mouse     2 GQTKPGVQMSRLLLGPMHHCKRYRSPEPDPYLSYRWKRRRSYSREH------------------- 47

  Fly  1442 KENKFGQPMQQQPPGMMPQMYGYQAPQQQSKIGYPRTGAPLTHSASFSSAQRPTALQFHQQHQQQ 1506
             |.:...|.:::||                    ||.....:|       .|....:.:::|:..
Mouse    48 -EGRLRYPSRREPP--------------------PRRSRSRSH-------DRIPYQRRYREHRDS 84

  Fly  1507 QHLQQQQQHPQQQQHQHSSFGVGMMSRNYYNMPKQPERKPLQTFDPYAYPKPNQMQPVKYQQQQQ 1571
            ...:.:::.|        |||     .:.|...:...|:           :..:..|.:.::...
Mouse    85 DTYRCEERSP--------SFG-----EDCYGSSRSRHRR-----------RSRERAPYRTRKHAH 125

  Fly  1572 HPHTQFQNASAGGGGGGAAGLQYDPNTNTQLFYASPASSSSNKQPQQPQQQQQQQQSQLQQSNSV 1636
            |.|.:...:                        .|.|||.|             |||..:.|.||
Mouse   126 HCHKRRTRS------------------------CSSASSRS-------------QQSSKRSSRSV 153

  Fly  1637 IFNHSGQQHQPHQQQQNEMSKSALGLHFIETAKPVIQDDADGHLIYHTGDILHHRYKIMATLGEG 1701
                                                :||.:|||:...||.|..||:|:..||||
Mouse   154 ------------------------------------EDDKEGHLVCRIGDWLQERYEIVGNLGEG 182

  Fly  1702 TFGRVVKVKDMERDYC-MALKIIKNVEKYREAAKLEINALEKIAQKDPHCDHLCVKMIDWFDYHG 1765
            |||:||:..|..|... :|||||:||.||||||:||||.|:||.:||.....|||.|.|||::||
Mouse   183 TFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG 247

  Fly  1766 HMCIVFEMLGLSVFDFLRENNYEPYPLDQVRHMAYQLCYSVKFLHDNRLTHTDLKPENILFVDSD 1830
            ||||.||:||.:.|:||:|||::||||..|||||||||::::|||:|:||||||||||||||:|:
Mouse   248 HMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSE 312

  Fly  1831 YTSHYNHKINREVRRVKNTDVRLIDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSI 1895
            :.:.||...:.|.:.||||.:|:.||||||||||||:|||:|||||.|||||||||:||||||||
Mouse   313 FETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSI 377

  Fly  1896 GCILFELYLGITLFQTHDNREHLAMMERILGQIPYRMARNHTLYSKTKTKYFYHGKLDWDEKSSA 1960
            ||||||.|.|.||||||:|||||.|||:|||.||     :|.::...|.||||.|.|.|||.||.
Mouse   378 GCILFEYYRGFTLFQTHENREHLVMMEKILGPIP-----SHMIHRTRKQKYFYKGGLVWDENSSD 437

  Fly  1961 GRYVRDHCKPLFLCQLSDSEDHCELFSLIKKMLEYEPSSRITLGEALHHPFFDRLPPHHR 2020
            ||||:::||||....|.||.:|.:||.|:::|||::|:.||||.|||.||||..|.|..|
Mouse   438 GRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPEER 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DoaNP_001014681.2 PKc_CLK 1679..2012 CDD:271036 209/333 (63%)
S_TKc 1692..2012 CDD:214567 203/320 (63%)
Clk3XP_036010394.1 PKc_CLK3 159..489 CDD:271116 210/334 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 483 1.000 Domainoid score I404
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000672
OrthoInspector 1 1.000 - - otm42815
orthoMCL 1 0.900 - - OOG6_100708
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R660
SonicParanoid 1 1.000 - - X440
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.840

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