DRSC/TRiP Functional Genomics Resources

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Protein Alignment Doa and Clk3

DIOPT Version :10

Sequence 1:NP_001014681.2 Gene:Doa / 43415 FlyBaseID:FBgn0265998 Length:2045 Species:Drosophila melanogaster
Sequence 2:NP_031739.4 Gene:Clk3 / 102414 MGIID:1098670 Length:490 Species:Mus musculus


Alignment Length:629 Identity:253/629 - (40%)
Similarity:336/629 - (53%) Gaps:162/629 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1393 DPFMQQQHMPAHQQQQHLPHKLQQSYSSSHVPKQAPKSGLAMFLQKNTNKENKFGQPMQQQPPGM 1457
            ||::..:            .|.::|||..|                    |.:...|.:::||  
Mouse    13 DPYLSYR------------WKRRRSYSREH--------------------EGRLRYPSRREPP-- 43

  Fly  1458 MPQMYGYQAPQQQSKIGYPRTGAPLTHSASFSSAQRPTALQFHQQHQQQQHLQQQQQHPQQQQHQ 1522
                              ||.....:|       .|....:.:::|:.....:.:::.|      
Mouse    44 ------------------PRRSRSRSH-------DRIPYQRRYREHRDSDTYRCEERSP------ 77

  Fly  1523 HSSFGVGMMSRNYYNMPKQPERKPLQTFDPYAYPKPNQMQPVKYQQQQQHPHTQFQNASAGGGGG 1587
              |||     .:.|...:...|:           :..:..|.:.::...|.|.:...:       
Mouse    78 --SFG-----EDCYGSSRSRHRR-----------RSRERAPYRTRKHAHHCHKRRTRS------- 117

  Fly  1588 GAAGLQYDPNTNTQLFYASPASSSSNKQPQQPQQQQQQQQSQLQQSNSVIFNHSGQQHQPHQQQQ 1652
                             .|.|||.|             |||..:.|.||                
Mouse   118 -----------------CSSASSRS-------------QQSSKRSSRSV---------------- 136

  Fly  1653 NEMSKSALGLHFIETAKPVIQDDADGHLIYHTGDILHHRYKIMATLGEGTFGRVVKVKDMERDYC 1717
                                :||.:|||:...||.|..||:|:..|||||||:||:..|..|...
Mouse   137 --------------------EDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKS 181

  Fly  1718 -MALKIIKNVEKYREAAKLEINALEKIAQKDPHCDHLCVKMIDWFDYHGHMCIVFEMLGLSVFDF 1781
             :|||||:||.||||||:||||.|:||.:||.....|||.|.|||::||||||.||:||.:.|:|
Mouse   182 QVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEF 246

  Fly  1782 LRENNYEPYPLDQVRHMAYQLCYSVKFLHDNRLTHTDLKPENILFVDSDYTSHYNHKINREVRRV 1846
            |:|||::||||..|||||||||::::|||:|:||||||||||||||:|::.:.||...:.|.:.|
Mouse   247 LKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSV 311

  Fly  1847 KNTDVRLIDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCILFELYLGITLFQT 1911
            |||.:|:.||||||||||||:|||:|||||.|||||||||:||||||||||||||.|.|.|||||
Mouse   312 KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQT 376

  Fly  1912 HDNREHLAMMERILGQIPYRMARNHTLYSKTKTKYFYHGKLDWDEKSSAGRYVRDHCKPLFLCQL 1976
            |:|||||.|||:|||.||     :|.::...|.||||.|.|.|||.||.||||:::||||....|
Mouse   377 HENREHLVMMEKILGPIP-----SHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYML 436

  Fly  1977 SDSEDHCELFSLIKKMLEYEPSSRITLGEALHHPFFDRLPPHHR 2020
            .||.:|.:||.|:::|||::|:.||||.|||.||||..|.|..|
Mouse   437 QDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPEER 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DoaNP_001014681.2 PHA03247 <205..634 CDD:223021
PKc_CLK 1679..2012 CDD:271036 209/333 (63%)
Clk3NP_031739.4 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..138 36/280 (13%)
PKc_CLK3 142..472 CDD:271116 210/334 (63%)
Blue background indicates that the domain is not in the aligned region.

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