DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33203 and Paqr4

DIOPT Version :10

Sequence 1:NP_001138119.2 Gene:CG33203 / 43414 FlyBaseID:FBgn0053203 Length:500 Species:Drosophila melanogaster
Sequence 2:NP_001017377.1 Gene:Paqr4 / 302967 RGDID:1309533 Length:273 Species:Rattus norvegicus


Alignment Length:270 Identity:103/270 - (38%)
Similarity:144/270 - (53%) Gaps:12/270 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 QLLPWQDMPTYLQFNPYVLRGYRPLQTFKGCLLSLFYWHNESINILTHAIPIFYILAIVPGLMPW 237
            :||.|...|.:||||.:||.||||..:..|||.||||.|||..||.||.:.:...|.:||..|||
  Rat     8 RLLDWASSPPHLQFNKFVLTGYRPASSGSGCLRSLFYLHNELGNIYTHGLALLGFLVLVPMTMPW 72

  Fly   238 DSGYK--FLSFCHVFGSVAPWCGSFVYHLFMNIEKGENVYYTLLKLDMVGIWVSQSFGALPLVTA 300
            ....|  :|...|....:||...|.:|||||..:.|..||..||.|||.|:.:..:.||||::..
  Rat    73 SQLGKDGWLGGTHCVACLAPPAASVLYHLFMCHQGGSPVYTRLLALDMCGVCLVNTLGALPIIHC 137

  Fly   301 TTLCFPPVLKWL---IIVSYCVLSLWGLYKALTASSPWQRRLCFALPFAMRSILTFLRIRGMVGG 362
            |..|.|    ||   .::.|..||....::||||.|...|...|......|.::...|..|:..|
  Rat   138 TLACRP----WLRPAALMGYTALSGVAGWRALTAPSTSARLRAFGWQAGARLLVFGARGVGLGSG 198

  Fly   363 SHMALSHVYLQVEVDGVSILGGAIGAMRIPEKWFPGVVDFYLNSHNIMHVLVVVAVYSMHKATIK 427
            :..:|. .||:  :|.:::|||.:...|:||:|.||..|::.|||.|||:|.|.::..:|...:.
  Rat   199 APGSLP-CYLR--MDALALLGGLVNVARLPERWGPGRFDYWGNSHQIMHLLSVGSILQLHAGVVP 260

  Fly   428 DFEWMSTQTC 437
            |..|.:...|
  Rat   261 DLLWAARHAC 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33203NP_001138119.2 HlyIII 208..421 CDD:470885 80/217 (37%)
Paqr4NP_001017377.1 HlyIII 43..254 CDD:470885 80/217 (37%)

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