DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nepl20 and Mmel1

DIOPT Version :10

Sequence 1:NP_651645.1 Gene:Nepl20 / 43412 FlyBaseID:FBgn0039613 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001101467.2 Gene:Mmel1 / 313755 RGDID:1309299 Length:774 Species:Rattus norvegicus


Alignment Length:717 Identity:192/717 - (26%)
Similarity:332/717 - (46%) Gaps:97/717 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 AAEIESFMNQKVDPCKDFYAFSCGNYKR------INSALNMRVLTTGVFETLTKGLNRKILKMLN 103
            ||.|...|:|...||.:||.::||.:.|      .||..::..:.....|.:.||    :|:..:
  Rat    94 AARILQNMDQSKKPCDNFYQYACGGWLRHHVIPETNSRYSVFDILRDELEVILKG----VLEDSS 154

  Fly   104 TPHDSHDTPEDIQVKHFYESCLQIKELNSTYSEKLKRLIAEFGTMPL-------LEGSSWQ-EDD 160
            ..|    .|...:.|..|.||:....:....||.|..::...|..|:       ..|..|: |..
  Rat   155 VQH----RPAVEKAKTLYRSCMNQSVIEKRDSEPLLNVLDMIGGWPVAMDKWNETMGPKWELERQ 215

  Fly   161 FDWLNTTARMAHRYGIMSIIGVGVATDFANNQKNIIYINQQEFPLKTRSMYMDNETAIYRQNY-- 223
            ...||:      ::....:|.:.:..|..|:.:::|||:|....:.:|..|...::...|:.|  
  Rat   216 LAVLNS------QFNRRVLIDLFIWNDDQNSSRHVIYIDQPTLGMPSREYYFKEDSHRVREAYLQ 274

  Fly   224 -QNNIQLILEKYLGVKDE--LARKAAKEMFEFEVDLAHGLVDNNKHLNLRDLIELLTVAELRERY 285
             ..::..:|.:.|.:..|  |.::...::...|..||:..|...|..::..|...:.:.||:||:
  Rat   275 FMTSVATMLRRDLNLPGETDLVQEEMAQVLHLETHLANATVPQEKRHDVTALYHRMGLEELQERF 339

  Fly   286 AP-----TLDTDQLIFVSMGEKI-SDKVYEYNRRYQQNLVEVIERTPKSTVANYLFLRLIWEFIQ 344
            ..     ||....::.....|.: :::|..|...|.:||.|:|:..|..|:.|||..||:   :.
  Rat   340 GLKGFNWTLFIQNVLSSVQVELLPNEEVVVYGIPYLENLEEIIDVFPAQTLQNYLVWRLV---LD 401

  Fly   345 KPSGVAEKPTEACVDFTKTYFAKNLDNMIYRR---YKNEKSSREIDSMW---------------- 390
            :...::::..||.||:.|..:...::.:.:|.   |.|......:.|::                
  Rat   402 RIGSLSQRFKEARVDYRKALYGTTMEEVRWRECVSYVNSNMESAVGSLYIKRAFSKDSKSIVSEL 466

  Fly   391 -HQLKSTFKETLLSSPALDWIEPSTRSLAIAKLEAMTLEVN--NYVKE----NFTEEFA------ 442
             .:::|.|.:.|   ..|:|::..::..|..|...:..::.  :|:.|    :..||::      
  Rat   467 IEKIRSVFVDNL---DELNWMDEESKKKAQEKALNIREQIGYPDYILEDNNRHLDEEYSSLTFSE 528

  Fly   443 DLNLQNTDCVENLRQVQMLQAKQMRQLYHQPAKPLEAGELLS-YTPSNILLENSIKVPVALLQPF 506
            ||..:|.  ::||:.......|::|:...|....:.|..:.: |:|:    .|.|..|..:|||.
  Rat   529 DLYFENG--LQNLKNNAQRSLKKLREKVDQNLWIIGAAVVNAFYSPN----RNLIVFPAGILQPP 587

  Fly   507 YIWSDVYPNAVMFGTLAYLIGHELIHGFDDSGRKFDEKGNSKDWWDEKSSSNFLKRRDCFTKQYG 571
            :...| .|.|:.||.:..:||||:.|||||:||.||:.||..|||...|:.:|.::..|...||.
  Rat   588 FFSKD-QPQALNFGGIGMVIGHEITHGFDDNGRNFDKNGNMLDWWSNFSARHFRQQSQCMIYQYS 651

  Fly   572 RYVY---DGIQLKESTAQSENIADNGGMRLAYTAYRKWYENQLTLPNGAQDMTKETLPNLRYTAK 633
            .:.:   |...:...:...||||||||:|.||.||.:|      |..|.:|   :.||.|..|..
  Rat   652 NFSWELADNQNVNGFSTLGENIADNGGVRQAYKAYLQW------LAEGGRD---QRLPGLNLTYA 707

  Fly   634 QLFFISFAQSWCNDVHPKVKALQVSTDDHMPGKFRVIGTLSNFEEFSKEFNCHAGSAMNPIEKCI 698
            |||||::||.||....|:.....:.||.|.|.|:||:|:|.|...||:.|:|..||.|:|:.:|.
  Rat   708 QLFFINYAQVWCGSYRPEFAIQSIKTDVHSPLKYRVLGSLQNLPGFSEAFHCPRGSPMHPMNRCR 772

  Fly   699 LY 700
            ::
  Rat   773 IW 774

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl20NP_651645.1 M13 56..697 CDD:341056 186/701 (27%)
Mmel1NP_001101467.2 Stop-transfer sequence. /evidence=ECO:0000255 14..21
M13 106..772 CDD:341056 186/701 (27%)
Blue background indicates that the domain is not in the aligned region.

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