DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nepl20 and nep-11

DIOPT Version :9

Sequence 1:NP_651645.1 Gene:Nepl20 / 43412 FlyBaseID:FBgn0039613 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_494538.1 Gene:nep-11 / 173685 WormBaseID:WBGene00017557 Length:848 Species:Caenorhabditis elegans


Alignment Length:778 Identity:196/778 - (25%)
Similarity:336/778 - (43%) Gaps:160/778 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LVLAAPTS---EDVLNQDTPYMKELMRQ----AKAAEIESFMNQKVDPCKDFYAFSCGN------ 69
            :|..||||   |...:.:.|...|:...    ..|....:.||..||||.||:.|:||.      
 Worm   136 IVPEAPTSPEPEVTTSTEKPKEPEVCSTPGCVRAATHFLNAMNTSVDPCDDFFEFACGQWNDQHP 200

  Fly    70 ------------YKRINSALNMRVLTTGVFETLTKGLNRKILKMLNTPHDSHDTPEDIQVKHFYE 122
                        |.|......:|||......|.::.:|                    ..:..|.
 Worm   201 IPDDMYGFGTFAYAREQVRQQLRVLLEQEVVTESESIN--------------------MARATYR 245

  Fly   123 SCLQIKELNSTYSEKLKRLIAEFGTMPLLEGSSWQEDDFDWLNTTARMAHRYGIMSIIGVGVATD 187
            ||:...:|:...:..|...:.|.|..|||: .:|.:..|::.:........||:.....:.:..|
 Worm   246 SCMNKTQLDELMTGPLFETLTELGEWPLLQ-ENWDKTKFNFTSLLVNSRRDYGVDVFFQLYIYAD 309

  Fly   188 FANNQKNIIYINQQEFPL--KTRSMYMD-----NETAIYRQNYQNNIQLILEKYLGVKDELARKA 245
            ..|..:|.::|:|....|  .||..|::     :....||: |...|..:|:    ....|.|..
 Worm   310 SKNTSRNTLFIDQSTLALGRGTRDYYLNTTLFSSHMTAYRK-YLRQIAHLLK----TDGNLTRSE 369

  Fly   246 A------KEMFEFEVDLAHGLVDNNKHLN---------LRDLIELLTVAELRERYAPTLDTDQLI 295
            :      :::.:||::||..:|..::..|         ::||..||          |.:|     
 Worm   370 SEMNADIEKIIDFEIELAKIIVAEDERRNNTRLYNKRQIQDLYNLL----------PQVD----- 419

  Fly   296 FVSMGEKI--SDKVYEYNR---------RYQQNLVEVIERTPKSTVANYLFLRLI---------- 339
            :|...:.|  ||..:.::.         .|.|::.|:||:|....:.||:..|::          
 Worm   420 WVPFFQSIAPSDLTHLFHNETEIIICEIEYLQHVSELIEKTDVGLLTNYVLWRVVQSNVRYLDER 484

  Fly   340 -----WEFIQKPSGVAEKPT--EACVDFTKTYFAKNLDNMIYRRYKNEKSSREIDSMWHQLKSTF 397
                 .:|::..:|..:.|.  :.|.....|........:..:.:..|....|...|...|:::|
 Worm   485 FEDIKQDFLKVMTGQQQSPPRWKDCAQVPSTVLPLAAGAIYVQAHFQESDKHEALRMIMHLRNSF 549

  Fly   398 KETLLSSPALDWIEPSTRSLAIAKLEAMTLEVNNYVKENFT-------EEFADLNLQNTDCVENL 455
            .:.:..:   ||::..|:::||.|..:|   :||....:.|       :::..|::.::|....:
 Worm   550 ADLVRQN---DWMDEETKAVAIEKANSM---INNIGYPDVTNDLPKLDKQYLGLSISDSDTYYYI 608

  Fly   456 --RQVQMLQAKQMRQLYHQPAKPLEAGEL--------LSYTPSNILLENSIKVPVALLQPFYIWS 510
              :.|..:|:::.::|    .||.:..|.        ..|:|.    :|:|..|..:|||.: :|
 Worm   609 MKKSVVWMQSREFQKL----TKPFDKHEFDISPAVVNAFYSPE----KNAITFPAGILQPPF-FS 664

  Fly   511 DVYPNAVMFGTLAYLIGHELIHGFDDSGRKFDEKGNSKDWWDEKSSSNFLKRRDCFTKQYGRYVY 575
            ..:|.||.:|.:..:||||:.|||||.|.::|:.||..:||.|.|.::|..||.|..:|||.|..
 Worm   665 GTFPKAVNYGAIGAVIGHEITHGFDDQGSQYDKDGNLHNWWSESSLNSFDTRRRCIVEQYGNYTV 729

  Fly   576 --DGIQLKESTAQSENIADNGGMRLAYTAYRKWYENQLTLPNGAQDMTKETLPNL-RYTAKQLFF 637
              ...::.....|.||||||||::.|:.||:|:     ...||.:    ..||.| :||.:|:||
 Worm   730 PKTNFRVNGKLTQGENIADNGGVKEAFQAYQKY-----VTENGEE----PRLPGLQQYTNEQIFF 785

  Fly   638 ISFAQSWCNDVHPKVKALQVSTDDHMPGKFRVIGTLSNFEEFSKEFNCHAGSAMNPIEKCILY 700
            :|:|..||..........||.||:|.|..|||||.|||.:.|:..:.|...:.:||..|||::
 Worm   786 VSYAHFWCGKKKEAAAMQQVLTDEHSPEVFRVIGVLSNMQAFADVYKCPRNAPVNPDHKCIVW 848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl20NP_651645.1 PepO 50..691 CDD:226118 182/728 (25%)
M13 56..697 CDD:189000 182/728 (25%)
nep-11NP_494538.1 PepO 174..848 CDD:226118 187/738 (25%)
M13 181..845 CDD:189000 182/728 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

Return to query results.
Submit another query.