DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nepl20 and nep-10

DIOPT Version :9

Sequence 1:NP_651645.1 Gene:Nepl20 / 43412 FlyBaseID:FBgn0039613 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_494532.2 Gene:nep-10 / 173684 WormBaseID:WBGene00017555 Length:711 Species:Caenorhabditis elegans


Alignment Length:787 Identity:181/787 - (22%)
Similarity:297/787 - (37%) Gaps:174/787 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KLFCIWIASHVLSVLVL----------------AAPT--SEDVLNQDTPYMKELMRQAK------ 44
            ||...||| ..|::|:|                .||.  |:|.|.:..|..|.....::      
 Worm     9 KLSSPWIA-FALNLLLLIVFLALVTVHIKMTIDVAPVFKSDDPLPRGDPDQKPATIDSETQTVDE 72

  Fly    45 -------------AAEIESFMNQKVDPCKDFYAFSCGNYKRINSALNMRVLTTGVFETLTKGLNR 96
                         |.|:.::.:..||||:|||...||.:.. :||:....:.| ...||:|.:..
 Worm    73 PRNVCESPECITLAHELHNYKDPSVDPCQDFYQHFCGKFYE-HSAIGQGRMAT-KRSTLSKLIRE 135

  Fly    97 KILKMLNTPHDSHDTPEDIQVKHFYESCLQ---IKELNSTYSEKLKRL---IAEFGTMPLLEGSS 155
            .:||...:...|.:|     :|..|..|.:   |.:|||...:.|..:   |.:.|..|:|: ..
 Worm   136 FLLKNKTSTSKSENT-----MKQVYAKCRELQKISDLNSIPPQALLDIFSDIKKIGAWPVLD-KD 194

  Fly   156 WQEDDFDWLNTTARMAHRYG------------------IMSIIGVGVATDFANNQKNIIYINQQE 202
            |....|: ||...|.....|                  |...:..||       ||:::.     
 Worm   195 WDGSKFN-LNEMLRQLVNLGETHLGFFHFDFIARPYVLIKPPLKQGV-------QKSVLE----- 246

  Fly   203 FPLKTRSMYMDNETAIYRQNYQNNIQLILEKYLGVK-DELARKAAKEMFEFEVDLAHGLVDNNKH 266
               |...|.::.......|.:..::....|....:| |:|.|.:...:         ||:.:.:.
 Worm   247 ---KVVKMILEANEIKMDQGFSEDLDEYFELSNRIKIDKLPRTSRSIV---------GLLPDVRR 299

  Fly   267 LNLRDLIELLTVAELRERYAPTLDTDQLIFVSMGEKISDKVYEYN-----RRYQQN-LVEVIERT 325
            :|.|.||..:.......|:..||              ..||..|:     |..:.| |..:|..|
 Worm   300 INFRGLILEMMPRSKMNRFLGTL--------------FQKVVTYHHPLFVRDNETNHLDTIIRST 350

  Fly   326 PKSTVANYLFLRLIWEFIQKPSGVAEKPTEACVDFTKTYFAKNLDNMIYRRYKNEKSSREIDSMW 390
            ....:||||....|...|:..:...:...|.|.........:....:..|...::.:..|:..:.
 Worm   351 SNRALANYLIFNFIHSSIKFLTFGLKSDRERCEKIVVQELPRPSLRVFMRNCVDKGNREEVAKLT 415

  Fly   391 HQLKSTFKETLLSSPALDWIEPSTRSLAIAKLEAMTLEVNNYVKENF------TEEFADLNLQNT 449
            ..:|....|.:..|   |...||.:...:.|:||:...:.  ..::|      .:|:.:|.|..:
 Worm   416 ETVKENVLEMIRES---DSFTPSVKKRVLKKVEAIGAIIG--YPDHFDPPGTLDKEYENLTLDAS 475

  Fly   450 DCVENLRQVQMLQAKQMRQLYHQPAKPLEAGELLSYTPSNILLE---------NSIKVPVALL-Q 504
            |....:.|       ::.||..|......||: ...:||:.:||         |::.|....| .
 Worm   476 DSYYKMSQ-------KLHQLRLQHQMEFLAGQ-TPLSPSDQVLEVNAHYDSKDNALTVLAPFLDD 532

  Fly   505 PFYIWSDVYPNAVMFGTLAYLIGHELIHGFDDSGRKFDEKGNSKDWWDEKSSSNFLKRRDCFTKQ 569
            ||:  ...||..|......:|||||..|..|....:.|      .|:..:..:.:.||..|...|
 Worm   533 PFF--DSTYPEYVNLIFTGFLIGHEFGHSIDPKILRRD------GWYKTEDMTEYGKRAQCLIDQ 589

  Fly   570 YGRYVYD----GIQLKESTAQSENIADNGGMRLAYTAYRKWYENQLTLPNGAQDMTKETLPNLRY 630
            |..  ||    |.|:..:....|.:.|..|..:.:.|::|...:::....|.:|   :.|..|.:
 Worm   590 YDN--YDDPDHGKQMNGTYCIGEIVGDWVGRDVTWRAFKKMDLSKMQKLIGFED---KNLDQLYF 649

  Fly   631 TAKQLFFISFAQSWCNDVHPK-VKAL-QVSTDDHMPGKFRVIGTLSNFEEFSKEFNCHAGSAMNP 693
            ..:.|||       |.   |: :|:| |:.:|.|....|||.|..||..:|:|.|||..||.|||
 Worm   650 RIQSLFF-------CG---PRSMKSLEQLLSDPHPTEVFRVNGIYSNMPQFAKAFNCPIGSPMNP 704

  Fly   694 IEKCILY 700
            .:||.::
 Worm   705 EKKCKMF 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl20NP_651645.1 PepO 50..691 CDD:226118 159/693 (23%)
M13 56..697 CDD:189000 162/693 (23%)
nep-10NP_494532.2 M13 97..709 CDD:189000 163/694 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6404
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.870

Return to query results.
Submit another query.