DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nepl19 and frma

DIOPT Version :10

Sequence 1:NP_651644.1 Gene:Nepl19 / 43411 FlyBaseID:FBgn0039612 Length:671 Species:Drosophila melanogaster
Sequence 2:NP_572226.2 Gene:frma / 31464 FlyBaseID:FBgn0029769 Length:611 Species:Drosophila melanogaster


Alignment Length:709 Identity:148/709 - (20%)
Similarity:264/709 - (37%) Gaps:221/709 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 EMRSYMQQDADACENFYDYSCGNWPQINPANDAYPRETNFVQLLLKAYSHKQQRLMEQPANVETD 128
            :::|:.|  ||.|:|||..:|||| ..:.|.|:|   .:|:..|...|..|...|::...  |.|
  Fly    18 QVKSHPQ--ADPCQNFYKVACGNW-SASHATDSY---ESFMDRLDYNYQEKLADLLDNER--EDD 74

  Fly   129 EVAVL-RLKEFYASCLLFRQVPEDLYRRQLQEIVADFGRMPVLSLPGQEWPAEEFDWLDTVARIK 192
            |...| :|:.||.:|.  :.:.:|...|.|:.::.                      ::.:...:
  Fly    75 EPHFLQQLRNFYTACR--KPLSQDQVLRILEHLIV----------------------MENIQNEE 115

  Fly   193 RQYGFDILLLFQQSADRIYVGQPKQILPEANRKAVAEDIANHLERHLGVDPKVAVTTAREITEFE 257
            ...|.......|...|          |.::|...:.:.:.:| .:|.  ||.   ||.||     
  Fly   116 LSVGLTAAFRLQVLID----------LNDSNTYDIWKQLMSH-RKHW--DPN---TTNRE----- 159

  Fly   258 QKIAAIMVDRRVGVMSKLYTPSDADYVDVSKLTQFVETVLDRELLANESLYQHVPDYLMKID--- 319
             .:...|.|:....:.|:..|....|.              |||   ..|.:.:..|..:.|   
  Fly   160 -PLTREMFDKLWASLPKIPFPFKEYYW--------------REL---SELEEKIMSYGSEDDGFD 206

  Fly   320 --ELVTETPPHVL-----ANYVF--------------NELLKHFYYERAESVVE----------- 352
              :|||..||..:     .|..:              ||.:..:.|.|.:.|.|           
  Fly   207 SGDLVTRIPPFWMMPWPNGNITYENLSQMAHWLDIKANEFILTYIYMRLKLVAEGVSTESWHIDR 271

  Fly   353 -QCVSRVRDLFGELLDH---MLFE----QYEDEGTLKDIYVVWQQLQRSF-------RGVLQNSS 402
             ||..:.|    ::|.|   .|.|    :.::|..|:||:.   :|::.|       |.....|:
  Fly   272 DQCAEQSR----QILSHPAAWLVEKNHPRLKEEPVLQDIFA---ELKQRFGQKLLANRNNFTRST 329

  Fly   403 ANWLVPETREQLLEQLNTTSLVINGYAEV---NFTQRYEELHLKPRDYLHNLRTILNHQSLRVKV 464
            .::|:.:.:..   :|..:.|..|..|:.   ...:.|.::|:...||..||...|||.....|.
  Fly   330 QHFLLGKLKRM---RLRLSILPRNSSAQSMVRRIERHYRDVHMNASDYFGNLHIGLNHSRSHKKY 391

  Fly   465 K------------------------------TQTSVTYDPVGKRVLLPVALLQPNFLWSRYYPKA 499
            .                              |..|..|......:::|::||:|.| ::...|..
  Fly   392 AQLWAIVFGRQLIPSRISKSDLYPTQVRGYGTYASAFYIVKQNMLIVPLSLLEPPF-YTHGQPSI 455

  Fly   500 VRYGSLGTLLAQQLAHSLEDASKWDAKSFA-----------------EYSKRKSCFKEQYGRLRL 547
            :.|.:||.:|..:|:|..:.    :..:|:                 .:.:...|.:.::||.|.
  Fly   456 LTYSALGFILGHELSHGFDS----EGMTFSSHGVGSSAVDRELDRNPRFQQELGCLRRRFGRKRY 516

  Fly   548 NGHYLPESDLQAENIADNLAIQVAYHAYRRLLAELDPSFLGSESLPQLNLGSRRLFFLSFAQLWC 612
                        |..||...:::||.||.. .|:.|..  .:.|..:| :..::.||.:|||.:|
  Fly   517 ------------EKFADASGLELAYSAYFD-TAQTDHK--RNRSAEEL-VTQKQQFFHNFAQFFC 565

  Fly   613 ND-----ANEQFRDKQSLFLGTPNALRVLGALSNFRAFGRDFNCGTASRMTSPQKCQLF 666
            :|     |::...|::          ||..|:::|..|...|:||.:.|.   ::|:|:
  Fly   566 SDKELLQAHDHGSDRK----------RVNDAVAHFEPFREAFSCGPSPRR---RQCRLY 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl19NP_651644.1 M13 73..664 CDD:341056 144/696 (21%)
frmaNP_572226.2 GluZincin 25..601 CDD:472708 142/685 (21%)

Return to query results.
Submit another query.