DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nepl19 and F41C6.4

DIOPT Version :9

Sequence 1:NP_651644.1 Gene:Nepl19 / 43411 FlyBaseID:FBgn0039612 Length:671 Species:Drosophila melanogaster
Sequence 2:NP_001129930.1 Gene:F41C6.4 / 185599 WormBaseID:WBGene00018278 Length:393 Species:Caenorhabditis elegans


Alignment Length:496 Identity:94/496 - (18%)
Similarity:166/496 - (33%) Gaps:163/496 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 MQQDADACENFYDYSCGNWPQINPANDAYPRETNFVQLLLKAYSHKQQRLMEQPA---NVETDEV 130
            :.|.:|.|::||.::|       |..|     .:|:.|:..|...|:....::.:   |::.:| 
 Worm    29 IDQSSDPCDDFYRHAC-------PVGD-----YDFLVLMKYAPIFKELETSQEESAWENLKIEE- 80

  Fly   131 AVLRLKEFYASCLLFRQVPEDLYRRQLQEIVADFGRMPVLSLPGQEWPAEEFDWLDTVARIKRQY 195
            |:..:|            |.::.    .||.|.|.|: .|.:.....||     :.|        
 Worm    81 ALNNIK------------PGEIE----NEISAYFERV-FLDMCQNNDPA-----MTT-------- 115

  Fly   196 GFDILLLFQQSADRIYVGQPKQILPEANRKAVAEDIANHLERHLGVDPKVAVTTAREITEFEQKI 260
               .||..||           .:..|.:.|..||   |.|.| ||.|.    ...|...:|:.::
 Worm   116 ---FLLRTQQ-----------MLSHEMSTKCRAE---NCLLR-LGGDS----NCTRAANDFKSRV 158

  Fly   261 AAIMVDRRVGVMSKLYTPSDADYVDVSKLTQFVETVLDRELLANESLYQHVPDYLMKIDELVTET 325
            |                          |.|             :.|.||   :|::|:.|.:...
 Worm   159 A--------------------------KKT-------------DSSHYQ---EYVLKLRENIAGW 181

  Fly   326 PPHVLANYVFNELLKHFYYERAESVVEQCVSRVRDLFGELLDHMLFEQYEDEGTLKDIYVVWQQL 390
            .....|   .|.||...:....:::            ...|.:|:           |:.:.|.|:
 Worm   182 KNKTRA---VNILLDGNFKVGVDNI------------NSFLMNMV-----------DVLLQWIQV 220

  Fly   391 -----QRSFRGVLQNSSANWLVPETREQLLEQLNTTSLVINGYAEVNFTQRYEELHLKPRDYL-- 448
                 :..|..:||.:.  |:..:...:.||.:.....||:.|. :...:..:.|....:|:|  
 Worm   221 YKYIAKNPFELILQETP--WVNDQKINRALEAVARDLFVIDEYG-IQLRENIDALMKTEQDFLKC 282

  Fly   449 -------HNLRTIL--NHQSLRVKVKTQTSVTYDPVGKRVLLPVALLQPNFLWSRYYPKAVRYGS 504
                   |:|...:  .|.....:..|.....||...:...:...:  |....:.....|...|.
 Worm   283 SADFSGKHDLFCSIYSYHFMFNGRTTTVLHFGYDATNRHPYIYFGM--PFIARAANSEMAANLGL 345

  Fly   505 LGTLLAQQLAHSL-EDASKWDAKSFAEYSKRK--SCFKEQY 542
            .|.::..:|:||| |:.||   .....||..:  :|.:.||
 Worm   346 AGYVVGHELSHSLIENPSK---SYLLPYSSAEAINCIQTQY 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl19NP_651644.1 PepO 67..657 CDD:226118 94/496 (19%)
M13 73..664 CDD:189000 93/492 (19%)
F41C6.4NP_001129930.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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