DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nepl18 and Ece1

DIOPT Version :9

Sequence 1:NP_651643.1 Gene:Nepl18 / 43410 FlyBaseID:FBgn0039611 Length:682 Species:Drosophila melanogaster
Sequence 2:XP_006239337.1 Gene:Ece1 / 94204 RGDID:620293 Length:769 Species:Rattus norvegicus


Alignment Length:705 Identity:194/705 - (27%)
Similarity:300/705 - (42%) Gaps:125/705 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 MKPEVSPCDDFYTHACGNWHRHNPAQLLGDVMTDNFKLISKGFDRRLQRLLRANDLQ-SELEKKM 117
            |.|.|.||.||:::|||.|.:.||.. .|......|..:.:.....::.||..:... ||.|||.
  Rat   114 MDPTVDPCQDFFSYACGGWIKANPVP-DGHSRWGTFSNLWEHNQAIIKHLLENSTASASEAEKKA 177

  Fly   118 QRFYMSC-NLVHRDDVHYKLALENVIREYG----TLPALVGAQWNSSDFSWWRTVAQIQHKYGKQ 177
            |.:|.:| |....:::..|..:| :|.:.|    |.|      |...:|.  .|:..:...|...
  Rat   178 QVYYRACMNETRIEELRAKPLME-LIEKLGGWNITGP------WAKDNFQ--DTLQVVTAHYRTS 233

  Fly   178 IIIGLEIMHDIRNTSVNRV--------------YISQPDFKTINTRLTNLM------------EE 216
            ....:.:..|.:|::.|.:              |:::.:.:.:.|...|.|            :.
  Rat   234 PFFSVYVSADSKNSNSNVIQVDQSGLGLPSRDYYLNKTENEKVLTGYLNYMVQLGKLLGGGDEDS 298

  Fly   217 VRTSMDLQQYFGLSSSVAKHTAEQLTELERTFSSGGSGAATLQESLSLY--TVADLQEKYSDHLN 279
            :|..|  ||.....:::|..|..|  |..|            .|.|..:  |.|:|| ..:..:|
  Rat   299 IRPQM--QQILDFETALANITIPQ--EKRR------------DEELIYHKVTAAELQ-TLAPAIN 346

  Fly   280 FTEFLGLIL--GEENIPKSLYIYDEEYLDKALLTMRSTPLATQANYVLWKL-------LEDFLVD 335
            :..||..|.  .|.|..:.:.:||:|||.:....:.||......||::|.|       |:....|
  Rat   347 WLPFLNAIFYPVEINESEPIVVYDKEYLRQVSTLINSTDKCLLNNYMMWNLVRKTSSFLDQRFQD 411

  Fly   336 AQPKDMV-------------KWCTESTKKYFGKLAEHAVYKRYRNPDVESEVHKIWDQIKGIFRQ 387
            |..|.|.             |:|...|:...|........|.....|.::...:|..:||..|.:
  Rat   412 ADEKFMEVMYGTKKTCLPRWKFCVSDTENNLGFALGPMFVKATFAEDSKNIASEIILEIKKAFEE 476

  Fly   388 RLLGDKLDWISNATRTLAIEKLERMHLNINSY-----DEENFENVYGEVFIDRLNYVSNVQQLLI 447
            .|  ..|.|:...||..|.||.:.:: |:..|     |.:..:.|:        |..:.|..|..
  Rat   477 SL--STLKWMDEDTRRSAKEKADAIY-NMIGYPNFIMDPKELDKVF--------NDYTAVPDLYF 530

  Fly   448 AKGIRFVA---RINQPADSVDAT---ELLGFTPA-----YNIQENNITIPVALLQPRYFWGDQYP 501
            ...:||..   |:.  ||.:...   :....||.     |:..:|.|..|..:||.. |:....|
  Rat   531 ENAMRFFNFSWRVT--ADQLRKAPNRDQWSMTPPMVNAYYSPTKNEIVFPAGILQAP-FYTRSSP 592

  Fly   502 EALKYATLGYLLAHEMLHGFDDDGRQYDASGNLAPWWDLKSRYEFEERRKCFQAQYHEYQYGGSK 566
            .||.:..:|.::.||:.|.|||.||:||..|||.|||...|...|:::.:|...||:.|...|..
  Rat   593 NALNFGGIGVVVGHELTHAFDDQGREYDKDGNLRPWWKNSSVEAFKQQTECMVQQYNNYSVNGEP 657

  Fly   567 LPESKDQSENIADSGGLKLAYAAYELWLGQQSEEVLQRETMEGLPFNSRQLFFLGYAQLLCDDVQ 631
            :.......|||||:||||.||.||:.|:.:...|    :.:..|...|.||||||:||:.|.   
  Rat   658 VNGRHTLGENIADNGGLKAAYRAYQNWVKKNGAE----QILPTLGLTSNQLFFLGFAQVWCS--- 715

  Fly   632 FLFQPWVSQ----SDRHAPSKYRVIGPLSNFQEFPWVFNCSQSAPMDPEYKCAIY 682
             :..|..|.    :|.|:||::||||.|||.:||...|.|...:||:|.:||.::
  Rat   716 -VRTPESSHEGLITDPHSPSRFRVIGSLSNSKEFSEHFRCPLGSPMNPRHKCEVW 769

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl18NP_651643.1 PepO 54..682 CDD:226118 194/703 (28%)
M13 58..679 CDD:189000 190/696 (27%)
Ece1XP_006239337.1 PepO 105..769 CDD:226118 194/703 (28%)
M13 118..767 CDD:189000 191/697 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344490
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.850

Return to query results.
Submit another query.