DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nepl18 and frma

DIOPT Version :9

Sequence 1:NP_651643.1 Gene:Nepl18 / 43410 FlyBaseID:FBgn0039611 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_572226.2 Gene:frma / 31464 FlyBaseID:FBgn0029769 Length:611 Species:Drosophila melanogaster


Alignment Length:716 Identity:157/716 - (21%)
Similarity:287/716 - (40%) Gaps:186/716 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 KIIVQAKVAEMKTMMKPEVSPCDDFYTHACGNWHRHNPAQLLGDVMTDNFKLISKGFDRRLQRLL 104
            ::||...|.::|:  .|:..||.:||..|||||...:        .||:::......|...|..|
  Fly     9 ELIVGLLVVQVKS--HPQADPCQNFYKVACGNWSASH--------ATDSYESFMDRLDYNYQEKL 63

  Fly   105 RANDLQSELE-------KKMQRFYMSCNL-VHRDDV----HYKLALENVIREYGT--------LP 149
             |:.|.:|.|       ::::.||.:|.. :.:|.|    .:.:.:||:..|..:        |.
  Fly    64 -ADLLDNEREDDEPHFLQQLRNFYTACRKPLSQDQVLRILEHLIVMENIQNEELSVGLTAAFRLQ 127

  Fly   150 ALVGAQWNSSDFSWWRTVAQIQHKYGKQIIIGLEIMHDIRNTSVNRVYISQPDFKTINTRLTNLM 214
            .|:... :|:.:..|:.:  :.|:           .|...||: ||..:::..|..:...|..: 
  Fly   128 VLIDLN-DSNTYDIWKQL--MSHR-----------KHWDPNTT-NREPLTREMFDKLWASLPKI- 176

  Fly   215 EEVRTSMDLQQYFGLSSSVAKHTAEQLTELERTFSSGGS------------------------GA 255
                 ....::|:.          .:|:|||....|.||                        |.
  Fly   177 -----PFPFKEYYW----------RELSELEEKIMSYGSEDDGFDSGDLVTRIPPFWMMPWPNGN 226

  Fly   256 ATLQESLSLYTVADLQEKYSDHLNFTEFLGLILGEENIPKSLYIYDEEYLDKALLTMRSTPLATQ 320
            .| .|:||       |..:...:...||:           ..|||           ||...:|..
  Fly   227 IT-YENLS-------QMAHWLDIKANEFI-----------LTYIY-----------MRLKLVAEG 261

  Fly   321 ANYVLWKLLEDFLVDAQPKDMVKWCTESTKKYFGKLAEHAVYKRYRNPDVESEVHKIWDQIKGIF 385
            .:...|.:..|            .|.|.:::.....|...|.|.:.....|..:..|:.::|..|
  Fly   262 VSTESWHIDRD------------QCAEQSRQILSHPAAWLVEKNHPRLKEEPVLQDIFAELKQRF 314

  Fly   386 RQRLLGDKLDWISNATRTLAIEKLERMHLNI-----NSYDE---ENFENVYGEVFIDRLNYVSNV 442
            .|:||.::.:: :.:|:...:.||:||.|.:     ||..:   ...|..|.:|.::..:|..|:
  Fly   315 GQKLLANRNNF-TRSTQHFLLGKLKRMRLRLSILPRNSSAQSMVRRIERHYRDVHMNASDYFGNL 378

  Fly   443 --------------QQLLIAKGIRFV-ARINQPADSVDATELLGF----TPAYNIQENNITIPVA 488
                          |...|..|.:.: :||::  ..:..|::.|:    :..|.:::|.:.:|::
  Fly   379 HIGLNHSRSHKKYAQLWAIVFGRQLIPSRISK--SDLYPTQVRGYGTYASAFYIVKQNMLIVPLS 441

  Fly   489 LLQPRYFWGDQYPEALKYATLGYLLAHEMLHGFDDDGRQYDAS--GNLAPWWDLKSRYEFEERRK 551
            ||:|.::...| |..|.|:.||::|.||:.||||.:|..:.:.  |:.|...:|.....|::...
  Fly   442 LLEPPFYTHGQ-PSILTYSALGFILGHELSHGFDSEGMTFSSHGVGSSAVDRELDRNPRFQQELG 505

  Fly   552 CFQAQYHEYQYGGSKLPESKDQSENIADSGGLKLAYAAYELWLGQQSEEVLQRETMEGLPFNSRQ 616
            |.:.::...:|            |..||:.||:|||:||  :...|::....|...|.:  ..:|
  Fly   506 CLRRRFGRKRY------------EKFADASGLELAYSAY--FDTAQTDHKRNRSAEELV--TQKQ 554

  Fly   617 LFFLGYAQLLCDDVQFLFQPWVSQSDRHAPSKYRVIGPLSNFQEFPWVFNCSQSAPMDPEYKCAI 681
            .||..:||..|.|.:.|      |:..|...:.||...:::|:.|...|:|   .|.....:|.:
  Fly   555 QFFHNFAQFFCSDKELL------QAHDHGSDRKRVNDAVAHFEPFREAFSC---GPSPRRRQCRL 610

  Fly   682 Y 682
            |
  Fly   611 Y 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl18NP_651643.1 PepO 54..682 CDD:226118 152/700 (22%)
M13 58..679 CDD:189000 150/693 (22%)
frmaNP_572226.2 GluZincin 25..601 CDD:301352 149/686 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454908
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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