DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nepl18 and nep-20

DIOPT Version :9

Sequence 1:NP_651643.1 Gene:Nepl18 / 43410 FlyBaseID:FBgn0039611 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_001317749.1 Gene:nep-20 / 188176 WormBaseID:WBGene00020293 Length:834 Species:Caenorhabditis elegans


Alignment Length:763 Identity:142/763 - (18%)
Similarity:263/763 - (34%) Gaps:211/763 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VLWLCLLVAIVPAMAKPSDAGDPFADDLTSDYAKKIIVQAKVAEMKTMMKPEVSPCDDFYTHACG 70
            :.||.|.:. .....|||....|....|             ..|:.......||.|.:||...||
 Worm   197 LFWLLLFIG-ARQDEKPSLCESPQCITL-------------AFELSAYQDTSVSKCHNFYKATCG 247

  Fly    71 NWHRHNPAQLLGDVMTDNFKLISKGFDRRLQRLLRAND--LQSELEKKMQRFYMSCNLVHRDDVH 133
            .:..|   |.|........|.:.|   |.::..||.|:  :.|:.|..::..:..||...::..:
 Worm   248 KYKHH---QALDKHRDAKKKEVVK---RIVREFLRRNESSITSKFEPAIRLMFGKCNKFSQNKTY 306

  Fly   134 YKLALENVIREYGTLPAL----VGAQWNSSD------------------------FSWWRTVAQI 170
              |.:...|.:.|..|.|    |...:|.:|                        |..:..:|..
 Worm   307 --LDIFKDIEKIGPWPVLKSDWVDVMFNLNDYLLSLVELGFTDFGLFKLEFRQLAFGQFPVIAPS 369

  Fly   171 QHKYGKQI--IIGLEIMHDIRNTSVNRVYISQPDFKTINTRLTNLMEEVRTSMDLQQYFGLSSSV 233
            :.|.|.|:  || |||:      ..|.|   |.|    ..:|:..:.|........::..|..:.
 Worm   370 EQKQGNQLEKII-LEIL------EANGV---QAD----RQKLSKYLREYSEFKSQLRHMSLEGTS 420

  Fly   234 AKHTAEQLTELERTFSSGGSGAATLQESLSLYTVADLQEKYSDHL---NFTEFLGLILGEENIPK 295
            .|:.....:.|....|      |.:|:...:.|.:.|..:....:   |.:.|.|          
 Worm   421 VKYIRYNASTLSVNIS------ALVQKMAPMSTSSGLVRRIQSGILITNSSSFFG---------- 469

  Fly   296 SLYIYDEEYLDKALLTMRSTPLATQANYVLWKLL--------------EDFLVDAQPKD------ 340
                   :.||..:   :.|...|.|||:::..:              |..|:|..|:.      
 Worm   470 -------KNLDAII---QQTHKRTLANYLIFHFIDAVTFDLTSGAKHSEHTLIDLLPRGSLQVLS 524

  Fly   341 -----------MVKWCTESTKKYFGKLAE-------HAVYKRYRNPDVESEVHKIWDQIKGIFRQ 387
                       ||:...:..|.....::|       |.|::       |.|..|:..:::.|   
 Worm   525 QDFVDEEDQGVMVEMAKDLKKHVVEMISEGSSLDKGHLVFE-------EKERRKLIRKVQDI--- 579

  Fly   388 RLLGDKLDWISNATRTLAIEKLERMHLNINSYDEENFENVYGEVFIDRLNYVSNVQQLLIAKGIR 452
                            |.:.|.....||      :|||.:       .|.|..::.: :|.|..|
 Worm   580 ----------------LVVTKYPLEILN------QNFEKL-------NLTYSDSLHK-IIQKLRR 614

  Fly   453 FVAR--INQPADSVDATELLGFTPAYNIQENNITIPVALLQPRYFWGDQYPEALKYATLGYLLAH 515
            |.:.  |......:|.|:...:..|:..|..|..|.:|.:....::...||..:....:|::::.
 Worm   615 FRSEQLIEYLGGDLDPTDKGMWGSAHYEQATNDLIIIAPIIDGPYFDTSYPNYVNIFFMGFIISR 679

  Fly   516 EMLHGFDDDGRQYDASGNLAPWWDLKSRYEFEERRKCFQAQYHEYQYGGSKLPESKDQSENIADS 580
            |:....|....:.|..|:...|...:|...|:...||::          .|:..::..:|.:||.
 Worm   680 ELGRSLDSVRIRKDEKGHTENWLKSESLKRFDNNVKCWR----------KKITGTRFLNEMLADH 734

  Fly   581 GGLKLAYAAYELWLGQQSEEVLQR------ETMEGLPFNSRQLFFL-----GYAQLLCDDVQFLF 634
            .|.:.::.|.:.|..:.:..::::      .|||.:.|:.:.|:|.     ...:|...|.:..:
 Worm   735 VGHEASFMALKKWEKEMNGTIVEKIRGYESMTMEQIFFHLQALYFCRPPGGSTGELTAKDARQHY 799

  Fly   635 QPWVSQSDRHAPSKYRVIGPLSNFQEFPWVFNCSQSAPMDPEYKCAIY 682
            ...|:::.::.|             :|...|.||.:..|:.:.||..:
 Worm   800 STRVNEAFKNMP-------------QFAKAFGCSSNQNMNSKTKCTFF 834

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl18NP_651643.1 PepO 54..682 CDD:226118 133/713 (19%)
M13 58..679 CDD:189000 131/706 (19%)
nep-20NP_001317749.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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