DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nepl18 and nep-1

DIOPT Version :10

Sequence 1:NP_651643.1 Gene:Nepl18 / 43410 FlyBaseID:FBgn0039611 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_496490.2 Gene:nep-1 / 174787 WormBaseID:WBGene00013926 Length:754 Species:Caenorhabditis elegans


Alignment Length:710 Identity:170/710 - (23%)
Similarity:291/710 - (40%) Gaps:124/710 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 VSPCDDFYTHACGNWHRHNPAQLLGDVMT--DNFKLISKGFDRRLQRLLRANDL--QSELEKKMQ 118
            :.|||||:.:||..|...:|   :.|.:|  ..|....:.....:::|...|..  .|:....::
 Worm    84 LDPCDDFFEYACRAWVDSHP---IPDDLTSYSQFTATREKVLAEMRKLYEDNTSIPTSKSIALIK 145

  Fly   119 RFYMSC------NLVHRDDVHYKLALENVIREYGTLPALVGAQWNSSDFSWWRTVAQIQHKYGKQ 177
            :.|.:|      |.|...|:..|      |:.||..|.:...:|..|.|...:.::.........
 Worm   146 QIYNTCMDTEKHNAVGARDLLEK------IKTYGYWPMVHNEKWRESTFDLTKLLSNTIQSRDVS 204

  Fly   178 IIIGLEIMHDIRNTSVNRVYISQPDFKTINTRLTNLMEEVRTSMDLQQY---------------- 226
            :........|.||.|...:...|.......:.....::|.:....::.|                
 Worm   205 VFFDFGPAEDSRNVSRRLLSFDQGSLGLGYSTRDYYLDEKKYEKQMKAYRKYTIGKVRYYTEDAG 269

  Fly   227 FGLSSSVAKHTAEQLTELERTFSSGGSGAATLQESLSLYTVA---DLQEKYSD------HLNFTE 282
            ..::.|..:...:::...|:.::.........:....||.|.   ||:|..|.      .|:.|.
 Worm   270 MAVNESKIESDVDEIIAFEKEWAQILVAEEDRRNYTKLYNVRRFDDLKEYMSIIDWKKLTLSTTP 334

  Fly   283 FLGLILGEENIPKSLYIYDEEYLDKALLTMRSTPLATQANYVL------W-----KLLED----- 331
            ||.....:.|  .|:.|.|.|||.|....:::|......||:|      |     |..||     
 Worm   335 FLVHSYLKTN--PSIIISDVEYLQKMNTLLQNTDPRIVTNYILLRWAGSWSQEIGKKYEDLQQEF 397

  Fly   332 -FLVDAQPKDMVKW--CTESTKKYFGKL--AEHAVY-KRYRNPDVESEVHKIWDQIKGIFRQRLL 390
             |.:..:.:...:|  |..|..   |||  |..::| ::|.:.:.::....:...::..||..:.
 Worm   398 AFQMYGRKQRQPRWKDCVSSAG---GKLSYASGSMYVRKYFDANAKNTTLDMITDLQEAFRNMMH 459

  Fly   391 GDKLDWISNATRTLAIEKLERMHLNINSYDEENFENVYGEVFIDRLNYVSNVQQL---------- 445
            .:  ||:...|:..|:||.::|...|...|                 ::.|.::|          
 Worm   460 AN--DWMDAETKKYALEKADQMLKQIGYPD-----------------FILNDEKLDDWYKGLEGA 505

  Fly   446 -------LIAKGIR-----FVARINQPADSVDATELLGFTPA-YNIQENNITIPVALLQPRYFWG 497
                   |:.|.|:     :..|:.:|.:..:.........| |:...|.|..|..:||..:| .
 Worm   506 PEDSFSQLVEKSIQWRNNFYYRRLLEPVNRFEFISSAAVVNAFYSPTRNAIAFPAGILQQPFF-D 569

  Fly   498 DQYPEALKYATLGYLLAHEMLHGFDDDGRQYDASGNLAPWWDLKSRYEFEERRKCFQAQYHEYQY 562
            .::|:||.|..:|.::.||:.|||||.|||:|..|||..|||..:..:|.||.:|...||.:.:.
 Worm   570 ARFPKALNYGGIGAVIGHEITHGFDDTGRQFDNVGNLRDWWDNTTSSKFNERTQCIIEQYADVKL 634

  Fly   563 GGS--KLPESKDQSENIADSGGLKLAYAAYELWL---GQQSEEVLQRETMEGLPFNSRQLFFLGY 622
            .|:  ::.....|.|||||:||:|.|:.||:.:|   |.|...:.|.|::     .:.||||:||
 Worm   635 RGTDLRINGKLTQGENIADNGGIKQAFKAYKSYLEKHGGQEARLPQFESL-----TNEQLFFVGY 694

  Fly   623 AQLLCDDVQFLFQPWVSQSDRHAPSKYRVIGPLSNFQEFPWVFNCSQSAPMDPEYKCAIY 682
            ||:.|.......:..:..:|.|:|...||...|:|..||...|.|...:||:|..:|.::
 Worm   695 AQVWCGAKTPETKTLLLLTDPHSPETARVNTVLTNQPEFAEAFKCPAGSPMNPTKRCVVW 754

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl18NP_651643.1 M13 58..679 CDD:341056 169/705 (24%)
nep-1NP_496490.2 M13 85..751 CDD:341056 169/704 (24%)

Return to query results.
Submit another query.