DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nepl18 and nep-11

DIOPT Version :9

Sequence 1:NP_651643.1 Gene:Nepl18 / 43410 FlyBaseID:FBgn0039611 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_494538.1 Gene:nep-11 / 173685 WormBaseID:WBGene00017557 Length:848 Species:Caenorhabditis elegans


Alignment Length:811 Identity:203/811 - (25%)
Similarity:332/811 - (40%) Gaps:176/811 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VLWLCLLVAIVPAMAKPSDA------------------GDPFADDLTSDYAKKIIVQAKVAEMKT 52
            :|..|||.|::.|:...:|.                  |||..:...:  |:...|...|.|..|
 Worm    80 LLLFCLLTAVLLAVIINTDKRIEAMKTDHATQTEHAGFGDPTENPTKT--AEDPRVPPIVPEAPT 142

  Fly    53 MMKPEVS---------------------------------PCDDFYTHACGNWHRHNPAQLLGDV 84
            ..:|||:                                 |||||:..|||.|:..:|      :
 Worm   143 SPEPEVTTSTEKPKEPEVCSTPGCVRAATHFLNAMNTSVDPCDDFFEFACGQWNDQHP------I 201

  Fly    85 MTDNFKLISKGFD---------RRLQRLLRANDLQSELEK-KMQR-FYMSC-NLVHRDDVHYKLA 137
            ..|.:     ||.         |:..|:|...::.:|.|. .|.| .|.|| |....|::.....
 Worm   202 PDDMY-----GFGTFAYAREQVRQQLRVLLEQEVVTESESINMARATYRSCMNKTQLDELMTGPL 261

  Fly   138 LENVIREYGTLPALVGAQWNSSDFSWWRTVAQIQHKYGKQIIIGLEIMHDIRNTSVNRVYISQP- 201
            .| .:.|.|..| |:...|:.:.|::...:...:..||..:...|.|..|.:|||.|.::|.|. 
 Worm   262 FE-TLTELGEWP-LLQENWDKTKFNFTSLLVNSRRDYGVDVFFQLYIYADSKNTSRNTLFIDQST 324

  Fly   202 --------DFKTINTRLTNLMEEVRTSM-DLQQYFGLSSSVAKHTAEQLTELERTFSSGGSGAAT 257
                    |:....|..::.|...|..: .:........::.:..:|...::|:........|..
 Worm   325 LALGRGTRDYYLNTTLFSSHMTAYRKYLRQIAHLLKTDGNLTRSESEMNADIEKIIDFEIELAKI 389

  Fly   258 L------QESLSLYTVADLQEKYS-----DHLNF------TEFLGLILGEENIPKSLYIYDEEYL 305
            :      :.:..||....:|:.|:     |.:.|      ::...|...|..|    .|.:.|||
 Worm   390 IVAEDERRNNTRLYNKRQIQDLYNLLPQVDWVPFFQSIAPSDLTHLFHNETEI----IICEIEYL 450

  Fly   306 DKALLTMRSTPLATQANYVLWKLL---------------EDFL--VDAQPKDMVKW--CTESTKK 351
            ......:..|.:....|||||:::               :|||  :..|.:...:|  |.:....
 Worm   451 QHVSELIEKTDVGLLTNYVLWRVVQSNVRYLDERFEDIKQDFLKVMTGQQQSPPRWKDCAQVPST 515

  Fly   352 YFGKLAEHAVYKRYRNPDVESEVHK-------IWDQIKGIFRQRLLGDKLDWISNATRTLAIEKL 409
            .. .||..|:|.:....  ||:.|:       :.:....:.||.      ||:...|:.:||||.
 Worm   516 VL-PLAAGAIYVQAHFQ--ESDKHEALRMIMHLRNSFADLVRQN------DWMDEETKAVAIEKA 571

  Fly   410 ERMHLNINSYDEEN----FENVY-GEVFIDRLNYVSNVQQLLIAKGIRFVARINQPADSVDATEL 469
            ..|..||...|..|    .:..| |....|...|...:::.::....|...::.:|.|..:    
 Worm   572 NSMINNIGYPDVTNDLPKLDKQYLGLSISDSDTYYYIMKKSVVWMQSREFQKLTKPFDKHE---- 632

  Fly   470 LGFTPA-----YNIQENNITIPVALLQPRYFWGDQYPEALKYATLGYLLAHEMLHGFDDDGRQYD 529
            ...:||     |:.::|.||.|..:|||.:|.| .:|:|:.|..:|.::.||:.|||||.|.|||
 Worm   633 FDISPAVVNAFYSPEKNAITFPAGILQPPFFSG-TFPKAVNYGAIGAVIGHEITHGFDDQGSQYD 696

  Fly   530 ASGNLAPWWDLKSRYEFEERRKCFQAQYHEYQYGGSKLPESK-------DQSENIADSGGLKLAY 587
            ..|||..||...|...|:.||:|...||..|     .:|::.       .|.|||||:||:|.|:
 Worm   697 KDGNLHNWWSESSLNSFDTRRRCIVEQYGNY-----TVPKTNFRVNGKLTQGENIADNGGVKEAF 756

  Fly   588 AAYELWLGQQSEEVLQRETMEGL-PFNSRQLFFLGYAQLLCDDVQFLFQPWVSQSDRHAPSKYRV 651
            .||:.::.:..||    ..:.|| .:.:.|:||:.||...|...:.........:|.|:|..:||
 Worm   757 QAYQKYVTENGEE----PRLPGLQQYTNEQIFFVSYAHFWCGKKKEAAAMQQVLTDEHSPEVFRV 817

  Fly   652 IGPLSNFQEFPWVFNCSQSAPMDPEYKCAIY 682
            ||.|||.|.|..|:.|.::||::|::||.::
 Worm   818 IGVLSNMQAFADVYKCPRNAPVNPDHKCIVW 848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl18NP_651643.1 PepO 54..682 CDD:226118 188/743 (25%)
M13 58..679 CDD:189000 184/736 (25%)
nep-11NP_494538.1 PepO 174..848 CDD:226118 185/713 (26%)
M13 181..845 CDD:189000 183/703 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

Return to query results.
Submit another query.