DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nepl17 and Mme

DIOPT Version :10

Sequence 1:NP_651641.1 Gene:Nepl17 / 43408 FlyBaseID:FBgn0039609 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_036740.1 Gene:Mme / 24590 RGDID:3098 Length:750 Species:Rattus norvegicus


Alignment Length:762 Identity:186/762 - (24%)
Similarity:321/762 - (42%) Gaps:137/762 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LIFVTLAVGSLAI----QGGVFKELTTPLGQQIMRIAKSAEMCSFMDTSVSPCDDFYGYACGNYA 70
            |:...:||..:|:    ..|:.|....        |..:|.:...||.|..||.||:.||||.:.
  Rat    36 LLLTIIAVTMIALYATYDDGICKSSDC--------IKSAARLIQNMDASAEPCTDFFKYACGGWL 92

  Fly    71 TINA--ATSQKDTNIRQLMFANYLRR-----VRQVLNEPRISTDRPMEVRVKYFYESCLDTAALR 128
            ..|.  .||.:.:|.      :.||.     ::.||.||: :.|.....:.|..|.||::.:|:.
  Rat    93 KRNVIPETSSRYSNF------DILRDELEVILKDVLQEPK-TEDIVAVQKAKTLYRSCINESAID 150

  Fly   129 TKQRSHLLSVLREFGGMPAVEGKSWDY---VGFDAIEMMAQLLRRYGKLTLLGVYVVPDHFNSQI 190
            ::....||::|.:..|.| |..::|:.   ..:.|.:.:|||..:|||..|:..:|..|..||..
  Rat   151 SRGGQPLLTLLPDIYGWP-VASQNWEQTYGTSWTAEKSIAQLNSKYGKKVLINFFVGTDDKNSTQ 214

  Fly   191 KRLQLGQ-RLDLAESD--EFASLWKK-----------YALKMRLRNLLGLSEELARKTAEEIIEL 241
            ..:...| ||.|...|  |...::|:           .|..:|....|.:.|........:::||
  Rat   215 HIIHFDQPRLGLPSRDYYECTGIYKEACTAYVDFMISVARLIRQEQRLPIDENQLSLEMNKVMEL 279

  Fly   242 ELELSRSAFDHRMNRDPRLMRHLTMLSNMSDAYGPILNVTRFVTSWLGSEYNLPVFESV------ 300
            |.|::.:........||.|:.:...|:.:.:.:...:|...|  ||  |.:...:..:|      
  Rat   280 EKEIANATTKPEDRNDPMLLYNKMTLAKLQNNFSLEINGKPF--SW--SNFTNEIMSTVNINIQN 340

  Fly   301 --------PSYLFQVKKILLSTPNHVVANYM--------LSSLLTDFEITANEEQQKVI------ 343
                    |.||.::|.||.......:.|.|        :|||..:::.:.|..::.:.      
  Rat   341 EEEVVVYAPEYLTKLKPILTKYSPRDLQNLMSWRFIMDLVSSLSRNYKESRNAFRKALYGTTSET 405

  Fly   344 -----CHERITELFPDVVDHMVYHSLEQQNPYIANEMRSLWVELKSSFREML--SSPDIEWLEKQ 401
                 |...:.....:.|..:...:.      .|.|.:.:..:|.:..||:.  :..|:.|::.:
  Rat   406 ATWRRCANYVNGNMENAVGRLYVEAA------FAGESKHVVEDLIAQIREVFIQTLDDLTWMDAE 464

  Fly   402 TREELLEKLNGMSFEIAGGQAVNFEEQFG--DLVVSS---------------ADYYGN-IQRLLE 448
            |:::..||            |:..:|:.|  |.::|:               .:|:.| ||.|..
  Rat   465 TKKKAEEK------------ALAIKERIGYPDDIISNENKLNNEYLELNYKEEEYFENIIQNLKF 517

  Fly   449 VKARILRTDLLRE--SSSVYYYHGVTATPIYETETNLVVLPVSYMQHRYLWDDIYPA----ALKY 507
            .:::.|:.  |||  ....:..........|.:..|.:|.|...:|..:     :.|    :|.|
  Rat   518 SQSKQLKK--LREKVDKDEWISGAAVVNAFYSSGRNQIVFPAGILQPPF-----FSARQSNSLNY 575

  Fly   508 GTLGFTMAHEMAHGFDDLNRLYDSRGNLNDNWSTQTKVGFELVKNCLADQFSGM---LYGNLRLR 569
            |.:|..:.||:.|||||..|.::..|:|.|.|:.|:...|:....|:..|:...   |.|...|.
  Rat   576 GGIGMVIGHEITHGFDDNGRNFNKDGDLVDWWTQQSANNFKDQSQCMVYQYGNFTWDLAGGQHLN 640

  Fly   570 RLKSQAESIADNVGIRIAQSAYWKWLDQVEMEETESLPHMTQSPEQLFFLSAAQFMCSDIYPERR 634
            .:.:..|:||||.||..|..||..::.  :..|.:.||.:..:.:|||||:.||..|....||..
  Rat   641 GINTLGENIADNGGIGQAYRAYQNYVK--KNGEEKLLPGLDLNHKQLFFLNFAQVWCGTYRPEYA 703

  Fly   635 ANFVRNNFHPPYEARVFAMMINSPAFAEAFQCSNSSKMNPPNKCLMY 681
            .|.::.:.|.|...|:...:.||..||:||.|..:|.|||..||.::
  Rat   704 VNSIKTDVHSPGNFRIIGTLQNSAEFADAFHCRKNSYMNPERKCRVW 750

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl17NP_651641.1 M13 55..678 CDD:341056 173/708 (24%)
MmeNP_036740.1 Stop-transfer sequence. /evidence=ECO:0000255 16..23
M13 79..748 CDD:341056 174/707 (25%)
Blue background indicates that the domain is not in the aligned region.

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