DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nepl17 and nep-6

DIOPT Version :9

Sequence 1:NP_651641.1 Gene:Nepl17 / 43408 FlyBaseID:FBgn0039609 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_494537.1 Gene:nep-6 / 184628 WormBaseID:WBGene00017550 Length:726 Species:Caenorhabditis elegans


Alignment Length:710 Identity:163/710 - (22%)
Similarity:301/710 - (42%) Gaps:110/710 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LTTPLGQQIMRIAKSAEMC-------------SFMDTSVSPCDDFYGYACGNYATINAATS--QK 79
            :|.|  :.:.:.:|...:|             :|.|.||.||.|||..|||.|:....|..  ||
 Worm    69 MTRP--EPVTQASKPRNVCETPGCVTLADQLLNFQDPSVDPCQDFYKAACGKYSEHEVANRRLQK 131

  Fly    80 DTNIRQLMFANYLRRVRQVLNEPRISTDRPMEVRVKYFYESC-------LDTAALRTKQRSHLLS 137
            ...|.|.|..|:|.:     ||   :::...|..::..|.:|       :..|.::|..| .|..
 Worm   132 KDIIIQRMIKNFLLK-----NE---TSESKSENVMRQVYRTCEGLKNEEIFNANMKTAFR-ELFK 187

  Fly   138 VLREFGGMPAVEGKSWDYVGFDAIEMMAQLLRRYGKLTLLGVYVVPDHFNSQIKRLQLGQRLDLA 202
            .:::.|..||.: |:||....:..||:..:: :.|. :..|::.:..   :::..|::..  |:|
 Worm   188 DIQKIGSWPAAD-KNWDETKLNLNEMLLNIV-KLGS-SNFGLFQIRP---TEVPFLEVAP--DMA 244

  Fly   203 ESDEFASLWKKYALKMRLRNLLGLSEELARKTAEEIIELELELSRSAFDH--------RMNRDPR 259
            .|.:.::.:::....:..:|.|...|.:.....|:.|.||..||:.|:|:        ::.....
 Worm   245 RSPKVSANFQQIIFDILEKNGLQPDENVIADDVEDYITLEETLSQYAYDYNAEKVQFSKLQAQVP 309

  Fly   260 LMRHLTMLSNMSDAYGPILNVTRFVTSWLGSEYNLPVFESVPSYLFQVKKILLSTPNHVVANYML 324
            .::...::..|.:.....|.||:.....:..:::|...|.:     .::|:|.|||...:|||::
 Worm   310 SLKLEKIIEEMMNPNRKKLLVTKVKPRMVAHKHSLFFDEKM-----NLEKLLKSTPKRTLANYLI 369

  Fly   325 SSLLTDFEITANEEQQKVI----CHERITELFPDV-VDHMVYHSLEQQNPYIANEMRSLWVELKS 384
            ...: |..:........||    |.:.:.|..|.. :...|.:..|:.|..|.:||..   |.|.
 Worm   370 FYYM-DHAMNGLSVHDNVIKKRNCEKLVIEYLPKASLRVFVRNHFEKGNLKIVDEMAE---ETKK 430

  Fly   385 SFREMLSSPDIEWLEKQTREELLEKLNGMSFEIAGGQAVNFEEQFGDLVVSSADYYGNIQRLLEV 449
            ||.|||.  :..||...:::..:.||..|      |:.:.:.::|        :..|.:.::.|.
 Worm   431 SFIEMLQ--ESTWLGADSKKNAILKLEKM------GKMIGYPKEF--------EKKGALDKMFET 479

  Fly   450 KARILRTD----LLRESSSVYYYHGV----TATPI-----------YETETNLVVLPVSYMQHRY 495
             .::|..|    :|::....:...|:    ..||:           :.|:.|.:...|.||... 
 Worm   480 -LKLLPKDTLYGILKKIGRFHMEQGIEFVALETPMDPVLPVLMTNAFYTDRNHLSFLVGYMDDP- 542

  Fly   496 LWDDIYPAALKYGTLGFTMAHEMAHGFDDLNRLYDSRGNLNDNWSTQTKVGFELVKNCLADQFS- 559
            |:|..||..:.....|..:|||.:||||......|..|.:......:....:.....||.||:: 
 Worm   543 LFDATYPKYVNIALTGNILAHETSHGFDTAGIKRDENGEVRSWMKPEDLKEYGKKTQCLVDQYNE 607

  Fly   560 --GMLYGNLRLRRLKSQAESIADNVGIRIAQSAYWKWLDQVE-MEETESLPHMTQSPEQLFFLSA 621
              ..::|. .|....:..|.:||.:|:.:|    ||..:::: .:|.:.:....::.::|:|.:|
 Worm   608 YDDPVFGK-NLNGTTTLNEMVADMIGVTVA----WKVFEKLDSSKEQKVIGFENENIDKLYFRAA 667

  Fly   622 AQFMCSDIYPERRANFVRNNFHPPYEARVFAMMINSPAFAEAFQCSNSSKMNPPNKCLMY 681
            |...|| :.|...........||....||..:..|.|.||.||.|...|.|||..:|.::
 Worm   668 ALDFCS-LPPTTSLVEELTRVHPTGNFRVNGIFSNMPQFATAFNCPEGSPMNPKTRCSIF 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl17NP_651641.1 PepO 49..672 CDD:226118 155/667 (23%)
M13 55..678 CDD:189000 155/667 (23%)
nep-6NP_494537.1 M13 105..724 CDD:189000 155/668 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28686
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.930

Return to query results.
Submit another query.