DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment WASp and LAS17

DIOPT Version :9

Sequence 1:NP_001263045.1 Gene:WASp / 43402 FlyBaseID:FBgn0024273 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_014824.1 Gene:LAS17 / 854353 SGDID:S000005707 Length:633 Species:Saccharomyces cerevisiae


Alignment Length:704 Identity:161/704 - (22%)
Similarity:229/704 - (32%) Gaps:271/704 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LLTQEENEAVFKLLGKKC-QTLNTAVVQIY-----KTEGSAHAHWKKRHTGV---VCFVKDSAIR 76
            ||...:.|.:.:.|.|.. :.::..|.::|     |.|      |  ::||:   :..|.|....
Yeast     3 LLNSSDKEIIKRALPKASNKIIDVTVARLYIAYPDKNE------W--QYTGLSGALALVDDLVGN 59

  Fly    77 SYFMRAYCLIKNE-LIWEHEIYDGMEVVKSRPFLLTFEGSDGHVGLNFVSEEECDSFFRIVDATI 140
            ::|::...:..:. :||:.|:|...|..:.|.|..|||..:...||.||...|...|.:.|....
Yeast    60 TFFLKLVDINGHRGVIWDQELYVNFEYYQDRTFFHTFEMEECFAGLLFVDINEASHFLKRVQKRE 124

  Fly   141 ETRNRK----------RQEKRNRQKSQ--QAPNA-----------------PLPQVQREPARPPP 176
            ...|||          .::.|..||||  ..|..                 .:|..:.:...|||
Yeast   125 RYANRKTLLNKNAVALTKKVREEQKSQVVHGPRGESLIDNQRKRYNYEDVDTIPTTKHKAPPPPP 189

  Fly   177 MQGGLSSTDGVQLRNNKINSVT----LTPAPA--------------PAQSKNFLSSSFG------ 217
            .......:|.....:: |||.|    .|||||              |..|...|.:.|.      
Yeast   190 PTAETFDSDQTSSFSD-INSTTASAPTTPAPALPPASPEVRKEETHPKHSLPPLPNQFAPLPDPP 253

  Fly   218 -----LGNNAKDKKRKVTKADISRPTNFVHLSHVGWDAQKGFDLAGNENDEVLNEFFVKAGVSEV 277
                 ..|||..:.:       |.|..|                                .:.|:
Yeast   254 QHNSPPQNNAPSQPQ-------SNPFPF--------------------------------PIPEI 279

  Fly   278 ELKDRDTRAFIY-----DFIQSNNVLASVKQYS---VESPTETAAPMPPPVPTRHPSNGN--QRT 332
            ......|..|.:     .|.|:.::  .:.|.:   .:.|.....|:|||.|.|..:.|:  :..
Yeast   280 PSTQSATNPFPFPVPQQQFNQAPSM--GIPQQNRPLPQLPNRNNRPVPPPPPMRTTTEGSGVRLP 342

  Fly   333 APPLPPARQPPPAVP----VT------------VPGA----ARAPPPP---NRPPPIST------ 368
            |||.||.|.|.|..|    ||            :|.|    ..|||||   :||.|..|      
Yeast   343 APPPPPRRGPAPPPPPHRHVTSNTLNSAGGNSLLPQATGRRGPAPPPPPRASRPTPNVTMQQNPQ 407

  Fly   369 ------------------APPPPPV--------------------------------SAPVVAPP 383
                              :||||||                                :.||..||
Yeast   408 QYNNSNRPFGYQTNSNMSSPPPPPVTTFNTLTPQMTAATGQPAVPLPQNTQAPSQATNVPVAPPP 472

  Fly   384 PP----------------------------PPPPPA----------AVPPPPPPPMPVGEIPVIT 410
            ||                            ||||||          |..|||||.||.      |
Yeast   473 PPASLGQSQIPQSAPSAPIPPTLPSTTSAAPPPPPAFLTQQPQSGGAPAPPPPPQMPA------T 531

  Fly   411 TTHAPTQAARPAAPAAPDPRNALMDAIRKG---TQLKKVDTTALSTGSGDSRSDLMKDIRQGTVL 472
            :|......|.....|.   |:||:.:||..   ..|:|||.:.|     |..|.|:::.|..:..
Yeast   532 STSGGGSFAETTGDAG---RDALLASIRGAGGIGALRKVDKSQL-----DKPSVLLQEARGESAS 588

  Fly   473 KPAKERELGSQRNSDSGAGTDALADALRRALAARGNAIHSDEDETESSDNEGEW 526
            .||.....|:     .|....:|||||..||..|...:.:.:|    .||..:|
Yeast   589 PPAAAGNGGT-----PGGPPASLADALAAALNKRKTKVGAHDD----MDNGDDW 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WASpNP_001263045.1 WH1 31..140 CDD:144235 29/118 (25%)
PBD 233..291 CDD:279166 6/62 (10%)
WH2 <433..453 CDD:280384 8/22 (36%)
LAS17NP_014824.1 EVH1_WASP-like 23..123 CDD:269916 27/107 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3671
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 76 1.000 Inparanoid score I1653
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001481
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_104030
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2175
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.840

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